RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 TIMP1P01033 207 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 C1QBP02746 253 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 HRGP04196 525 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MAS1P04201 325 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TCRBP04435 133 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TRAPPC2P0DI81 140 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TRAPPC2BP0DI82 140 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 HOXB2P14652 356 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MYOGP15173 224 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OPRD1P41143 372 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MNDAP41218 407 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MAZP56270 477 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 AP3S2P59780 193 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GALK2Q01415 458 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 DPTQ07507 201 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SNTA1Q13424 505 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GPM6BQ13491 265 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ELOA3BQ3SY89 546 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TMEM69Q5SWH9 247 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 KIAA1211LQ6NV74 962 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FIGLAQ6QHK4 219 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF836Q6ZNA1 936 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MS4A15Q8N5U1 240 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MORN4Q8NDC4 146 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ELOA3Q8NG57 546 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OR5M3Q8NGP4 307 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OR52N1Q8NH53 320 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 CCL4L1Q8NHW4 92 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SFXN5Q8TD22 340 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 BADQ92934 168 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 KIAA1143Q96AT1 154 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TEAD3Q99594 435 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 METTL17Q9H7H0 456 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 FGF22Q9HCT0 170 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 BCL2L10Q9HD36 194 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FGF20Q9NP95 211 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 WASH6PQ9NQA3 447 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MAN2C1Q9NTJ4 1040 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 C20orf141Q9NUB4 165 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TBX21Q9UL17 535 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SLC35A3Q9Y2D2 325 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 POM121CA8CG34 1229 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 RGS13O14921 159 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ARPC1BO15143 372 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 RECKO95980 971 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 CSTAP01040 98 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 HNRNPA1P09651 372 aaKnown RBP eCLIP4.4□□□□□ -1.7
USP44-201ENST00000258499 ITGB8P26012 769 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 PRKAR1BP31321 381 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 GJA4P35212 333 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 PSMA6P60900 246 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 RPS15AP62244 130 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 ERVK-25P63136 954 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ERV3-1Q14264 604 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 DECR1Q16698 335 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.4□□□□□ -1.7
USP44-201ENST00000258499 C4orf46Q504U0 113 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ZNF628Q5EBL2 1059 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 TANGO2Q6ICL3 276 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 METAP1DQ6UB28 335 aaPredicted RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 ADAMTSL4Q6UY14 1074 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 RFPL4BQ6ZWI9 263 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ANKRD33Q7Z3H0 272 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 TMED4Q7Z7H5 227 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ZNF619Q8N2I2 560 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 OR6N2Q8NGY6 317 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 OR2L8Q8NGY9 312 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 COQ8AQ8NI60 647 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 LGALS14Q8TCE9 139 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 PHOSPHO1Q8TCT1 267 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 DIO2Q92813 273 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 GAL3ST3Q96A11 431 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 CREB3L1Q96BA8 519 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ELMOD3Q96FG2 381 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 TOX2Q96NM4 488 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 FOXN4Q96NZ1 517 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 CNN2Q99439 309 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 PDCD10Q9BUL8 212 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 APOOQ9BUR5 198 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 SLC7A5P2Q9GIP4 190 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 PIGUQ9H490 435 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 C11orf49Q9H6J7 331 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 NIPAL2Q9H841 368 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 SYNPO2LQ9H987 977 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 SLC6A20Q9NP91 592 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 FBXO34Q9NWN3 711 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 ASB6Q9NWX5 421 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 TESQ9UGI8 421 aaKnown RBP4.4□□□□□ -1.7
USP44-201ENST00000258499 SLC23A1Q9UHI7 598 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 VWA8A3KMH1 1905 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 PTPRDP23468 1912 aa4.4□□□□□ -1.7
USP44-201ENST00000258499 POM121BA6NF01 834 aa4.4□□□□□ -1.71
USP44-201ENST00000258499 TVP23AA6NH52 213 aa4.4□□□□□ -1.71
USP44-201ENST00000258499 C11orf98E9PRG8 122 aa4.4□□□□□ -1.71
USP44-201ENST00000258499 KHNYNO15037 678 aaKnown RBP4.4□□□□□ -1.71
USP44-201ENST00000258499 NUPL2O15504 423 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms