RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 CCDC74AQ96AQ1 378 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 IFT27Q9BW83 186 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 RNF167Q9H6Y7 350 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 ETAA1Q9NY74 926 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 NUP210LQ5VU65 1888 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 J3QRE1 110 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 SLC2A10O95528 541 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 PAICSP22234 425 aaKnown RBP21.03■□□□□ 0.96
HOXD9-201ENST00000249499 ITGADQ13349 1161 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 PLK5Q496M5 336 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 LIPKQ5VXJ0 399 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 PMS2CLQ68D20 193 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 CADM2Q8N3J6 435 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 KLHL36Q8N4N3 616 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 B4GALNT2Q8NHY0 566 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 UFD1Q92890 307 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 TSLPQ969D9 159 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 EXOSC4Q9NPD3 245 aaKnown RBP21.03■□□□□ 0.96
HOXD9-201ENST00000249499 FGF21Q9NSA1 209 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 TNFRSF10DQ9UBN6 386 aa21.03■□□□□ 0.96
HOXD9-201ENST00000249499 SPIN1Q9Y657 262 aaPredicted RBP21.03■□□□□ 0.96
HOXD9-201ENST00000249499 A0A1B0GTQ1 180 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 SLC22A31A6NKX4 558 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 RIIAD1A6NNX1 92 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 PTNP21246 168 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 DHPSP49366 369 aaPredicted RBP21.02■□□□□ 0.96
HOXD9-201ENST00000249499 PSPHP78330 225 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ZXDAP98168 799 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ZNF45Q02386 682 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ARHGAP40Q5TG30 622 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ARHGAP11AQ6P4F7 1023 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 THSD4Q6ZMP0 1018 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 MINDY2Q8NBR6 621 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 BBS1Q8NFJ9 593 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 OR4C6Q8NH72 309 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ADIPOR1Q96A54 375 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 COQ7Q99807 217 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 ASPNQ9BXN1 380 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 INPP5EQ9NRR6 644 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 FAIMQ9NVQ4 179 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 WDFY4Q6ZS81 3184 aa21.02■□□□□ 0.96
HOXD9-201ENST00000249499 SAGE2PA6NJ88 616 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PFDN1O60925 122 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 NGFRP08138 427 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PEPDP12955 493 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 FUT1P19526 365 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ETV6P41212 452 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 BDH1Q02338 343 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 NR0B2Q15466 257 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PLBD1Q6P4A8 553 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 DCDC5Q6ZRR9 648 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 TM9SF4Q92544 642 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PPP1R14BQ96C90 147 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 SGTBQ96EQ0 304 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 COX4I2Q96KJ9 171 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 DPYSL5Q9BPU6 564 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 NUDT22Q9BRQ3 303 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ZNF649Q9BS31 505 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 OR8D2Q9GZM6 311 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 C6orf62Q9GZU0 229 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ENKD1Q9H0I2 346 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 NXF5Q9H1B4 397 aaKnown RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ERVK13-1Q9NX77 482 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 CRNNQ9UBG3 495 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 COL5A1P20908 1838 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 hCG_2014768A0A024R1R8 64 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 OR6C76A6NM76 312 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PRR23D1E9PI22 279 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 DLL1O00548 723 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 SCDO00767 359 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 SOCS6O14544 535 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 TO15178 435 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 YKT6O15498 198 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 AKAP8O43823 692 aaKnown RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 CBFA2T3O75081 653 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 IFNGP01579 166 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PRR23D2P0DMB1 279 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PNMTP11086 282 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 HPGDP15428 266 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ZNF3P17036 446 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 HK1P19367 917 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ATP6V1E1P36543 226 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 ACY1Q03154 408 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 CRYZQ08257 329 aaKnown RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 OR2G6Q5TZ20 316 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 WBP2NLQ6ICG8 309 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 PLPP5Q8NEB5 264 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 OR4F15Q8NGB8 312 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 EFHD2Q96C19 240 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 TGIF2Q9GZN2 237 aa21.01■□□□□ 0.95
HOXD9-201ENST00000249499 CAB39Q9Y376 341 aaPredicted RBP21.01■□□□□ 0.95
HOXD9-201ENST00000249499 A8MU76 341 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 SLC30A4O14863 429 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 GAAP10253 952 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 UBL4AP11441 157 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 GABRA5P31644 462 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 FHL1Q13642 323 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 RHBDD2Q6NTF9 364 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 RABEPKQ7Z6M1 372 aa21■□□□□ 0.95
HOXD9-201ENST00000249499 GATAD2BQ8WXI9 593 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms