RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LIX1LQ8IVB5 337 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 UBASH3BQ8TF42 649 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 OTULINQ96BN8 352 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 VSTM2LQ96N03 204 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 TMED9Q9BVK6 235 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 YIPF2Q9BWQ6 316 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 KCNN2Q9H2S1 579 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 TBC1D17Q9HA65 648 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 MEPEQ9NQ76 525 aaPredicted RBP20.23■□□□□ 0.83
RNF39-201ENST00000244360 CMC2Q9NRP2 79 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 FLRT3Q9NZU0 649 aa20.23■□□□□ 0.83
RNF39-201ENST00000244360 A0A0A6YYC8 382 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 A0A0B4J293 547 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 SMIM30A4D0T7 59 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 FAM183AA6NL82 134 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 I3L1I5 382 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 FOXS1O43638 330 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 IGKV1D-16P01601 117 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 CSF2P04141 144 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 BMP7P18075 431 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 CELP19835 753 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 MAZP56270 477 aaKnown RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 IL18Q14116 193 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 SF3A2Q15428 464 aaKnown RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 MEPCEQ7L2J0 689 aaKnown RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 CDK20Q8IZL9 346 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 SPRYD4Q8WW59 207 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 RNF31Q96EP0 1072 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 TMEM43Q9BTV4 400 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 DNAJB12Q9NXW2 375 aaKnown RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 HRO43593 1189 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 CTNSO60931 367 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 ERP29P30040 261 aaKnown RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 BMP8BP34820 402 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 ATP6V1E1P36543 226 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 FASLGP48023 281 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 CAV3P56539 151 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 SKP1P63208 163 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 ZNHIT3Q15649 155 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 ZNF791Q3KP31 576 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 SMARCD3Q6STE5 483 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 THSD4Q6ZMP0 1018 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 BMP8AQ7Z5Y6 402 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 LSRQ86X29 649 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 OR13C2Q8NGS9 318 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 ADAMTS18Q8TE60 1221 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 KISS1RQ969F8 398 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 TRAF4Q9BUZ4 470 aaPredicted RBP20.22■□□□□ 0.83
RNF39-201ENST00000244360 RBCK1Q9BYM8 510 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 UCK1Q9HA47 277 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 C2orf42Q9NWW7 574 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 HCN3Q9P1Z3 774 aa20.22■□□□□ 0.83
RNF39-201ENST00000244360 TMEM131Q92545 1883 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 A0A1B0GWA3 101 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 ANKRD34BA5PLL1 514 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 LYRM1O43325 122 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 PTP4A3O75365 173 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 RBM34P42696 430 aaKnown RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 ACAA2P42765 397 aaKnown RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 VASNQ6EMK4 673 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 ZNF595Q8IYB9 648 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 RIT1Q92963 219 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 TRIM63Q969Q1 353 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 ZNF285Q96NJ3 590 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 HDHD5Q9BXW7 423 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 CLDN16Q9Y5I7 305 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 CHURC1-FNTBB4DL54 471 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 NPIPB9F8W1W9 429 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 ADAM11O75078 769 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 RGS9O75916 674 aaPredicted RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 CHRNB1P11230 501 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 CAPZBP47756 277 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 INPP1P49441 399 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 ZNF141Q15928 474 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 TATDN3Q17R31 274 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 COL13A1Q5TAT6 717 aaPredicted RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 PRPF38BQ5VTL8 546 aaKnown RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 LSMEM1Q8N8F7 131 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 TCTN2Q96GX1 697 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 TRIM2Q9C040 744 aa20.21■□□□□ 0.83
RNF39-201ENST00000244360 MRPS33Q9Y291 106 aaKnown RBP20.21■□□□□ 0.83
RNF39-201ENST00000244360 FAM86C2PA6NEL3 165 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 RFPL3O75679 317 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 PSKH1P11801 424 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 ALAS2P22557 587 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 MTNR1BP49286 362 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 CLDN20P56880 219 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 FOXK2Q01167 660 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 ZSWIM7Q19AV6 140 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 YIF1BQ5BJH7 314 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 ZC3H14Q6PJT7 736 aaKnown RBP20.2■□□□□ 0.82
RNF39-201ENST00000244360 ACBD7Q8N6N7 88 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 OR51G2Q8NGK0 314 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 FYTTD1Q96QD9 318 aaKnown RBP20.2■□□□□ 0.82
RNF39-201ENST00000244360 KCNJ15Q99712 375 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 CHRDQ9H2X0 955 aa20.2■□□□□ 0.82
RNF39-201ENST00000244360 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 FAM240BA0A1B0GVZ2 78 aa20.19■□□□□ 0.82
RNF39-201ENST00000244360 NSA2O95478 260 aaKnown RBP20.19■□□□□ 0.82
RNF39-201ENST00000244360 PAICSP22234 425 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms