RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 LAMP1P11279 417 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 PRDX6P30041 224 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 CYLC2Q14093 348 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 ETFDHQ16134 617 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 TIGD2Q4W5G0 525 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 C6orf52Q5T4I8 152 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 OR4F3Q6IEY1 312 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 MFSD12Q6NUT3 480 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 BEND4Q6ZU67 534 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 TRPM8Q7Z2W7 1104 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 OR10D3Q8NH80 312 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 RNF138Q8WVD3 245 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 GMPPAQ96IJ6 420 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 OR52E6Q96RD3 313 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 NPAS1Q99742 590 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 LEF1Q9UJU2 399 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-201ENST00000242776 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
DDX39A-201ENST00000242776 A0A1W2PRB8 838 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 MYO1GB0I1T2 1018 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 TNFSF11O14788 317 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 NDUFB5O43674 189 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FADS1O60427 444 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 SS18L1O75177 396 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 SLITRK5O94991 958 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 SYNGR4O95473 234 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FRKP42685 505 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 NCBP2P52298 156 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 MANFP55145 182 aaKnown RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 MRPS22P82650 360 aaKnown RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 GANABQ14697 944 aaKnown RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 MLC1Q15049 377 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 STK32CQ86UX6 486 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FUNDC1Q8IVP5 155 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FITM2Q8N6M3 262 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 GATSQ8NAP1 163 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF675Q8TD23 568 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 CIDECQ96AQ7 238 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-201ENST00000242776 RHNO1Q9BSD3 238 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 BEX2Q9BXY8 128 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 ALG2Q9H553 416 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 FBXO34Q9NWN3 711 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 GPR52Q9Y2T5 361 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 NDUFAF1Q9Y375 327 aa12.28□□□□□ -0.44
DDX39A-201ENST00000242776 PRSS51A0A1B0GVH4 220 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 COX4I1P13073 169 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 IL32P24001 234 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 GPC1P35052 558 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 PSG6Q00889 435 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 BSPH1Q075Z2 132 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 KRT72Q14CN4 511 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 PGGHGQ32M88 737 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 ZNF672Q499Z4 452 aaPredicted RBP12.27□□□□□ -0.44
DDX39A-201ENST00000242776 COQ5Q5HYK3 327 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 FIGNL1Q6PIW4 674 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 GALNT10Q86SR1 603 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 SNX32Q86XE0 403 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 ARIH2OSQ8N7S6 290 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 PCYOX1LQ8NBM8 494 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 OR5P2Q8WZ92 322 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 ITCHQ96J02 903 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 ESRP2Q9H6T0 727 aaKnown RBP12.27□□□□□ -0.44
DDX39A-201ENST00000242776 TAS2R9Q9NYW1 312 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.44
DDX39A-201ENST00000242776 BTNL2Q9UIR0 455 aa12.27□□□□□ -0.44
DDX39A-201ENST00000242776 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.44
DDX39A-201ENST00000242776 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 RFXANKO14593 260 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 RAMP1O60894 148 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 AGTR1P30556 359 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 CLK3P49761 638 aaKnown RBP12.27□□□□□ -0.45
DDX39A-201ENST00000242776 HSPB3Q12988 150 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TAB1Q15750 504 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 VPS26BQ4G0F5 336 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TMEM107Q6UX40 140 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TREML1Q86YW5 311 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TRIML2Q8N7C3 387 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 STEAP2Q8NFT2 490 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 OR4A15Q8NGL6 344 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 VPS33AQ96AX1 596 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 CCDC115Q96NT0 180 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 AMDHD1Q96NU7 426 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TBL1XR1Q9BZK7 514 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 AMBRA1Q9C0C7 1298 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 GLIPR2Q9H4G4 154 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 TAGLN3Q9UI15 199 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 CDC42EP3Q9UKI2 254 aa12.27□□□□□ -0.45
DDX39A-201ENST00000242776 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
DDX39A-201ENST00000242776 KRT34O76011 436 aa12.26□□□□□ -0.45
DDX39A-201ENST00000242776 KCNH1O95259 989 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms