RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ACSM3Q53FZ2 586 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 EXOSC6Q5RKV6 272 aaKnown RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 BCL2L15Q5TBC7 163 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ZCCHC12Q6PEW1 402 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 PXKQ7Z7A4 578 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 CCL4L1Q8NHW4 92 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 SMAP2Q8WU79 429 aaPredicted RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ARSGQ96EG1 525 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 MEPEQ9NQ76 525 aaPredicted RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 USP36Q9P275 1121 aaKnown RBP17.31■□□□□ 0.36
CPSF3-201ENST00000238112 BAIAP2Q9UQB8 552 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 LOC105369274A0A096LPK9 316 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 A0A0A6YYJ9 748 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 A0A0G2JK05 382 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 AKR7A2O43488 359 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 TNFSF14O43557 240 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 SLC2A5P22732 501 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 NRG3P56975 720 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 KIAA1024LP59773 190 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 FCRL6Q6DN72 434 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 OR4N4Q8N0Y3 316 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ZNF614Q8N883 585 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 OR7G1Q8NGA0 311 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 PHF21AQ96BD5 680 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 PGLYRP3Q96LB9 341 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 HYLS1Q96M11 299 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 ABHD1Q96SE0 405 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 MED28Q9H204 178 aa17.31■□□□□ 0.36
CPSF3-201ENST00000238112 BRINP1O60477 761 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 IFNGP01579 166 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 GYPBP06028 91 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 RAB3BP20337 219 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 POU4F2Q12837 409 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 SLC25A35Q3KQZ1 300 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 HACD4Q5VWC8 232 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 CREB3L2Q70SY1 520 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 MS4A15Q8N5U1 240 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 OR5J2Q8NH18 312 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 SLC2A12Q8TD20 617 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 GHSRQ92847 366 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 SNAPC3Q92966 411 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 TSACCQ96A04 125 aaPredicted RBP17.3■□□□□ 0.36
CPSF3-201ENST00000238112 ZFYVE21Q9BQ24 234 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 CAPN10Q9HC96 672 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 ACTR10Q9NZ32 417 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 FBXL4Q9UKA2 621 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 MRPS2Q9Y399 296 aaKnown RBP17.3■□□□□ 0.36
CPSF3-201ENST00000238112 A0A1W2PRG6 482 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 GXYLT2A0PJZ3 443 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 NOTOA8MTQ0 251 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 CHP2O43745 196 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 PTP4A3O75365 173 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 RFPL3O75679 317 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 SC5DO75845 299 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 SOX30O94993 753 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 GPR75O95800 540 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 KIR2DL1P43626 348 aaPredicted RBP17.3■□□□□ 0.36
CPSF3-201ENST00000238112 GPLD1P80108 840 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 DMKNQ6E0U4 476 aaPredicted RBP17.3■□□□□ 0.36
CPSF3-201ENST00000238112 FAAH2Q6GMR7 532 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 RTL4Q6ZR62 310 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 PRSS41Q7RTY9 318 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 PMM1Q92871 262 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 FAM131CQ96AQ9 280 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 IRF2BPLQ9H1B7 796 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 DPAGT1Q9H3H5 408 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 NUDT15Q9NV35 164 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 HAO2Q9NYQ3 351 aa17.3■□□□□ 0.36
CPSF3-201ENST00000238112 KIAA0100Q14667 2235 aaKnown RBP17.29■□□□□ 0.36
CPSF3-201ENST00000238112 TRAV6A0A075B6T7 132 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 OR6C74A6NCV1 312 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 ERVH48-1M5A8F1 160 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 SERPINA3P01011 423 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 PEPDP12955 493 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 SLC6A6P31641 620 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 SRP9P49458 86 aaKnown RBP17.29■□□□□ 0.36
CPSF3-201ENST00000238112 NFATC4Q14934 902 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 PRICKLE4Q2TBC4 344 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 ARHGAP11AQ6P4F7 1023 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 ZNF767PQ75MW2 155 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 LRRC17Q8N6Y2 441 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 TMEM52Q8NDY8 209 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 STMN3Q9NZ72 180 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 PILRAQ9UKJ1 303 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 CA5BQ9Y2D0 317 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 NPFFR2Q9Y5X5 522 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 A0A0B4J2E0 115 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 A0A1B0GX12 115 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 H0Y8X5 98 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 H0YGG7 62 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 K7EQS6 105 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 RASGRP1O95267 797 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 BTCP35070 178 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
CPSF3-201ENST00000238112 LAMTOR1Q6IAA8 161 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 SDE2Q6IQ49 451 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 TEX19Q8NA77 164 aa17.29■□□□□ 0.36
CPSF3-201ENST00000238112 OR13C5Q8NGS8 318 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms