RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 A0A1W2PR77 199 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 FITM1A5D6W6 292 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 RIIAD1A6NNX1 92 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 POLR1CO15160 346 aaPredicted RBP14.9□□□□□ -0.02
UBE3D-201ENST00000237186 RNF13O43567 381 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 NGFRP08138 427 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 SBK2P0C263 348 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 SRFP11831 508 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 IL9P15248 144 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 HK1P19367 917 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 CD27P26842 260 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 SLC6A6P31641 620 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 SCN1BQ07699 218 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF267Q14586 743 aaPredicted RBP14.9□□□□□ -0.02
UBE3D-201ENST00000237186 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE3D-201ENST00000237186 B3GLCTQ6Y288 498 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 TMEM99Q8N816 258 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 OIT3Q8WWZ8 545 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 OTULINQ96BN8 352 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 SPACA7Q96KW9 195 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 FAM210AQ96ND0 272 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 PTCHD1Q96NR3 888 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 TNFRSF13CQ96RJ3 184 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 ATF6BQ99941 703 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 RBCK1Q9BYM8 510 aa14.9□□□□□ -0.02
UBE3D-201ENST00000237186 PAIP2BQ9ULR5 123 aaKnown RBP14.9□□□□□ -0.02
UBE3D-201ENST00000237186 TRIOBPQ9H2D6 2365 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TRAV27A0A087WT01 109 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 SHISA3A0PJX4 238 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 H0YIG0 161 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 GTPBP1O00178 669 aaKnown RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF3P17036 446 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 RFX2P48378 723 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 RFX3P48380 749 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TPTEP56180 551 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 MAT1AQ00266 395 aaKnown RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ASAH1Q13510 395 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TCTE1Q5JU00 501 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ARHGAP11AQ6P4F7 1023 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 MED25Q71SY5 747 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 NRARPQ7Z6K4 114 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 AKAP14Q86UN6 197 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 GPALPP1Q8IXQ4 340 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF614Q8N883 585 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ZNF615Q8N8J6 731 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 OR51A7Q8NH64 312 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 PELOQ9BRX2 385 aaKnown RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 KCNN2Q9H2S1 579 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 CAPN10Q9HC96 672 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 MCCC2Q9HCC0 563 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TRIM36Q9NQ86 728 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TIGARQ9NQ88 270 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ICAM5Q9UMF0 924 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 DAPL1A0PJW8 107 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 METTL12A8MUP2 240 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 PLPP2O43688 288 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 CD38P28907 300 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 BTG2P78543 158 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 GAS6Q14393 721 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 TRAM1Q15629 374 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 AGAP6Q5VW22 663 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 CAMKK1Q8N5S9 505 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 FAM160A2Q8N612 972 aaPredicted RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 CELF2-AS1Q8N7Q2 184 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 C16orf52Q8NHV5 167 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 RLN3Q8WXF3 142 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 AGAP4Q96P64 663 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 CCNL2Q96S94 520 aaPredicted RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 SLC38A3Q99624 504 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 RAB33BQ9H082 229 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 OR10A5Q9H207 317 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 PPP1R3EQ9H7J1 279 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ADGRL4Q9HBW9 690 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 ENAMQ9NRM1 1142 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 INIPQ9NRY2 104 aa14.89□□□□□ -0.03
UBE3D-201ENST00000237186 SIRT4Q9Y6E7 314 aaPredicted RBP14.89□□□□□ -0.03
UBE3D-201ENST00000237186 A0A1W2PQ09 198 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 ZC3H12DA2A288 527 aaKnown RBP14.88□□□□□ -0.03
UBE3D-201ENST00000237186 HTR3EA5X5Y0 456 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 SERINC4A6NH21 518 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 DYRK3O43781 588 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 SSX4O60224 188 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 RGS9O75916 674 aaPredicted RBP14.88□□□□□ -0.03
UBE3D-201ENST00000237186 IFNGP01579 166 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 MT-ND5P03915 603 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 CSF3P09919 207 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 MTNR1BP49286 362 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 FNTBP49356 437 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 GPR143P51810 404 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 CAV3P56539 151 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 TAS2R43P59537 309 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 POU4F2Q12837 409 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 SRSF5Q13243 272 aaKnown RBP14.88□□□□□ -0.03
UBE3D-201ENST00000237186 RIN1Q13671 783 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 SERTAD2Q14140 314 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 CRMP1Q14194 572 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 ERV3-1Q14264 604 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 KLHL12Q53G59 568 aa14.88□□□□□ -0.03
UBE3D-201ENST00000237186 KIRREL2Q6UWL6 708 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms