RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CCDC86Q9H6F5 360 aaKnown RBP12.11□□□□□ -0.47
MSH2-201ENST00000233146 MMP26Q9NRE1 261 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TMEM100Q9NV29 134 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TMEM161AQ9NX61 479 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 WWOXQ9NZC7 414 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 OARD1Q9Y530 152 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 A6NLC8 198 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 SYT5O00445 386 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TNFRSF10BO14763 440 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TOX3O15405 576 aaPredicted RBP12.11□□□□□ -0.47
MSH2-201ENST00000233146 ASGR2P07307 311 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 SBK2P0C263 348 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 G0S2P27469 103 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 S100A2P29034 98 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 ADNP2Q6IQ32 1131 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 C3orf49Q96BT1 292 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 ORAI3Q9BRQ5 295 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TMEM38AQ9H6F2 299 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 ABRACLQ9P1F3 81 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 PCDHB1Q9Y5F3 818 aa12.11□□□□□ -0.47
MSH2-201ENST00000233146 TRBV23OR9-2A0A075B6M9 112 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 FAM86C2PA6NEL3 165 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 SH3BGRLO75368 114 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 SLC25A27O95847 323 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 IGHA1P01876 353 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ADH1AP07327 375 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ARF4P18085 180 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 GABRR2P28476 465 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 SLC6A11P48066 632 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ADPRHP54922 357 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 PCBP3P57721 371 aaKnown RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 PSAPL1Q6NUJ1 521 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 CD300LDQ6UXZ3 194 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 SDR9C7Q8NEX9 313 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 EGFL8Q99944 293 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 PRDM5Q9NQX1 630 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 CPA4Q9UI42 421 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 MOKQ9UQ07 419 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 MMACHCQ9Y4U1 282 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 KIAA1671Q9BY89 1806 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 REM1O75628 298 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ATP1B1P05026 303 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 CD53P19397 219 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 CDK6Q00534 326 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 BIKQ13323 160 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 TDGQ13569 410 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 PRSS55Q6UWB4 352 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 ZNF852Q6ZMS4 543 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 MUC20Q8N307 709 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 TFGQ92734 400 aaPredicted RBP12.1□□□□□ -0.47
MSH2-201ENST00000233146 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 GPR61Q9BZJ8 451 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
MSH2-201ENST00000233146 MKRN2OSH3BPM6 223 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ATF1P18846 271 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 EPORP19235 508 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 C5AR1P21730 350 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 PDHA2P29803 388 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 CD81P60033 236 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 TEAD2Q15562 447 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ZBTB6Q15916 424 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 IL34Q6ZMJ4 242 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 LINGO2Q7L985 606 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 NPAS3Q8IXF0 933 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 TEX26Q8N6G2 289 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 OR2L5Q8NG80 312 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 OR4K2Q8NGD2 314 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 PAQR8Q8TEZ7 354 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 TNFSF18Q9UNG2 199 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 EXOGQ9Y2C4 368 aaKnown RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 ZNF197O14709 1029 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ZNF749O43361 778 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 FADS1O60427 444 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms