RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 WNT1P04628 370 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 DRD2P14416 443 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 RAD52P43351 418 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 OR6S1Q8NH40 331 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 TMEM255BQ8WV15 326 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 FAIM2Q9BWQ8 316 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 TEX12Q9BXU0 123 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 LRRC72A6NJI9 287 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 KHDRBS3O75525 346 aaKnown RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 RGS9O75916 674 aaPredicted RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 FGBP02675 491 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 PTAFRP25105 342 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 TRHRP34981 398 aaPredicted RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 KHDRBS2Q5VWX1 349 aaKnown RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 CDC73Q6P1J9 531 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 IKBIPQ70UQ0 350 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 PIGXQ8TBF5 258 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 PFDN5Q99471 154 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 ZCCHC2Q9C0B9 1178 aaKnown RBP13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 NEUROD4Q9HD90 331 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
PCDHB3-201ENST00000231130 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 NARSO43776 548 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 ANXA7P20073 488 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 PYCR1P32322 319 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 GPR1P46091 355 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 HSD17B13Q7Z5P4 300 aaPredicted RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 ARL5BQ96KC2 179 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 LATO43561 262 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 CLUP10909 449 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 TIMP2P16035 220 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 BTN2A1Q7KYR7 527 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 ACBD7Q8N6N7 88 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 PLA2G15Q8NCC3 412 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 PRRC1Q96M27 445 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 CYSLTR2Q9NS75 346 aa13.16□□□□□ -0.3
PCDHB3-201ENST00000231130 SELENOFO60613 162 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 FCMRO60667 390 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 CRYBA1P05813 215 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 GSTM3P21266 225 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 MAPK9P45984 424 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 PRLHRP49683 370 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 ARFIP1P53367 373 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 NDUFA9Q16795 377 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 BEX5Q5H9J7 111 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 C17orf47Q8NEP4 570 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 OR5W2Q8NH69 310 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 SPSB2Q99619 263 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 SARGQ9BW04 601 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 CNTRLQ7Z7A1 2325 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 GRM6O15303 877 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 SUSD5O60279 629 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 HTR3BO95264 441 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 RPLP2P05387 115 aaKnown RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 PRG2P13727 222 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 ACHEP22303 614 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 BLOC1S1P78537 153 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 FAM26DQ5JW98 314 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 ZDHHC20Q5W0Z9 365 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 Q6ZNB5 142 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 TRAM1L1Q8N609 369 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 GNPDA2Q8TDQ7 276 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 TCEAL4Q96EI5 215 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 PSMD9O00233 223 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 LEFTY2O00292 366 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 PPP3CBP16298 524 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 IFNGR2P38484 337 aa13.15□□□□□ -0.3
PCDHB3-201ENST00000231130 CLDN12P56749 244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms