RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SRXN1Q9BYN0 137 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 ACER3Q9NUN7 267 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 ARMCX1Q9P291 453 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 GMPR2Q9P2T1 348 aaKnown RBP12.32□□□□□ -0.44
VEGFA-201ENST00000230480 LEF1Q9UJU2 399 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-201ENST00000230480 USP22Q9UPT9 525 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 NDUFAF1Q9Y375 327 aa12.32□□□□□ -0.44
VEGFA-201ENST00000230480 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 TMEM229AB2RXF0 380 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 SEC14L5O43304 696 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 MGRN1O60291 552 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 CGAP01215 116 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 ADH6P28332 368 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 KIR2DL2P43627 348 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 PCBP3P57721 371 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 MTPNP58546 118 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 FADDQ13158 208 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 CAPRIN1Q14444 709 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 MRPL2Q5T653 305 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 EIF3MQ7L2H7 374 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 NET1Q7Z628 596 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 DHDDSQ86SQ9 333 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 PMM1Q92871 262 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
VEGFA-201ENST00000230480 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-201ENST00000230480 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 CXCL13O43927 109 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 TPST2O60704 377 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 KRT34O76011 436 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 GKN3PP0CG01 181 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 EPS8Q12929 822 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 SNTB1Q13884 538 aaKnown RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 PLEKHM3Q6ZWE6 761 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 CALHM3Q86XJ0 350 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 GRAMD2AQ8IUY3 354 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 ZZZ3Q8IYH5 903 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 GCNT2Q8N0V5 402 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 EID3Q8N140 333 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 LILRA2Q8N149 483 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 OR52P1PQ8NH57 321 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 NFKBIDQ8NI38 313 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 CA5BP1Q8WTZ4 195 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 MRGPRX4Q96LA9 322 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 PINK1Q9BXM7 581 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 ADAM19Q9H013 955 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 TMEM38AQ9H6F2 299 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 KAT8Q9H7Z6 458 aaKnown RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 P2RX2Q9UBL9 471 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF629Q9UEG4 869 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 TRIM33Q9UPN9 1127 aa12.3□□□□□ -0.44
VEGFA-201ENST00000230480 GPC6Q9Y625 555 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-201ENST00000230480 ROS1P08922 2347 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 A0A1W2PNV4 684 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 H3BNH8 94 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 SYT5O00445 386 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 TNFSF11O14788 317 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 FRS3O43559 492 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 CYP7B1O75881 506 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 DBIP07108 87 aaKnown RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 CTSSP25774 331 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 RYKP34925 604 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF41P51814 821 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 PON3Q15166 354 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 HSPB2Q16082 182 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 TMEM176BQ3YBM2 270 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 RABL3Q5HYI8 236 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 GKAP1Q5VSY0 366 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 C8orf82Q6P1X6 216 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 VWA1Q6PCB0 445 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 PIGWQ7Z7B1 504 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 SNX32Q86XE0 403 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms