RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SPACA7Q96KW9 195 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 TEAD3Q99594 435 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 THAP7Q9BT49 309 aaPredicted RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 DUSP22Q9NRW4 184 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SCN8AQ9UQD0 1980 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 GPR143P51810 404 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 KIAA1024LP59773 190 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 PITPNAQ00169 270 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SF3A2Q15428 464 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 LMX1AQ8TE12 382 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 AKAP1Q92667 903 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 ELSPBP1Q96BH3 223 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SLC25A36Q96CQ1 311 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 G6PC3Q9BUM1 346 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 C20orf141Q9NUB4 165 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 ASB6Q9NWX5 421 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 PLEKHB1Q9UF11 243 aaPredicted RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 CDHR4A6H8M9 788 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF879B4DU55 563 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 TMEM150CB9EJG8 249 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SCDO00767 359 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 XKRYO14609 159 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 KHNYNO15037 678 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 MAKP20794 623 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 RABIFP47224 123 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 PITPNBP48739 271 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 TPMTP51580 245 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SHHQ15465 462 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 ALG11Q2TAA5 492 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 NIPAL3Q6P499 406 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 GLCCI1Q86VQ1 547 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 YIPF7Q8N8F6 280 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 ZDHHC1Q8WTX9 485 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 SLC7A6Q92536 515 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 MRPL15Q9P015 296 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 CBLCQ9ULV8 474 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 MRPS2Q9Y399 296 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 MAU2Q9Y6X3 613 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 V9GYH0 126 aa13.86□□□□□ -0.19
UBE2D4-201ENST00000222402 THBS1P07996 1170 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 CD3GP09693 182 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 CLUP10909 449 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 GHSRQ92847 366 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MRGPRX1Q96LB2 322 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF681Q96N22 645 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 TGM7Q96PF1 710 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 NUDT15Q9NV35 164 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 CES1P1Q9UKY3 287 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 BAIAP2Q9UQB8 552 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ALG5Q9Y673 324 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 URB1O60287 2271 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 A0A0G2JMP0 313 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 A0A0X1KG70 313 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 CHURC1-FNTBB4DL54 471 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 B4DXG7 233 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MAGEB4O15481 346 aaPredicted RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 LALBAP00709 142 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 PSMD4P55036 377 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 RAB14P61106 215 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF79Q15937 498 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF676Q8N7Q3 588 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 OR4M2Q8NGB6 313 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 OR2A5Q96R48 311 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ISYNA1Q9NPH2 558 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 POT1Q9NUX5 634 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MRPL39Q9NYK5 338 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 NPAP1Q9NZP6 1156 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MN1Q10571 1320 aaPredicted RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 COL9A1P20849 921 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 GDI2P50395 445 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 ERVK-25P63136 954 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 POU4F2Q12837 409 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 AADACL4Q5VUY2 407 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 AVL9Q8NBF6 648 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 OR8K3Q8NH51 312 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 MOSPD2Q8NHP6 518 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 RSC1A1Q92681 617 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 WDFY2Q96P53 400 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 GAL3ST1Q99999 423 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 AICDAQ9GZX7 198 aa13.85□□□□□ -0.19
UBE2D4-201ENST00000222402 C5orf67F2Z3F1 127 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 OR2B3O76000 313 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 PEPDP12955 493 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 HCCSP53701 268 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 LRRC28Q86X40 367 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 ZNF527Q8NB42 609 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 ABHD4Q8TB40 342 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 THAP4Q8WY91 577 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 NECTIN4Q96NY8 510 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 CACNG6Q9BXT2 260 aa13.84□□□□□ -0.19
UBE2D4-201ENST00000222402 TPSD1Q9BZJ3 242 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms