RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RANBP3Q9H6Z4 567 aaPredicted RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 TMEM27Q9HBJ8 222 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ABRACLQ9P1F3 81 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 DOCK9Q9BZ29 2069 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 FABP7O15540 132 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 HYAL3O43820 417 aaPredicted RBP12.3□□□□□ -0.44
SRP54-201ENST00000216774 IFNGP01579 166 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 MMP15P51511 669 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 CRMP1Q14194 572 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 SLC25A35Q3KQZ1 300 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 CD276Q5ZPR3 534 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 FAAH2Q6GMR7 532 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 PHOSPHO2Q8TCD6 241 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 LRFN5Q96NI6 719 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 OR2M2Q96R28 347 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 ZCCHC4Q9H5U6 513 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
SRP54-201ENST00000216774 KLHL1Q9NR64 748 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 ST6GALNAC2Q9UJ37 374 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 TRAV27A0A087WT01 109 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 A0A0B4J2E0 115 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 A0A1B0GX12 115 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 SCAMP1O15126 338 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 BRINP1O60477 761 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 CTSVO60911 334 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 EML2O95834 649 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 HOXC4P09017 264 aaPredicted RBP12.3□□□□□ -0.44
SRP54-201ENST00000216774 SLC6A6P31641 620 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 PYCR1P32322 319 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 ACVR1BP36896 505 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 MAP3K8P41279 467 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 RBM34P42696 430 aaKnown RBP12.3□□□□□ -0.44
SRP54-201ENST00000216774 OR3A3P47888 321 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 SOX9P48436 509 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 RAG2P55895 527 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 P2RX3P56373 397 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 TOMM5Q8N4H5 51 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 CAMKVQ8NCB2 501 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 HAVCR2Q8TDQ0 301 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 HSD17B8Q92506 261 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 YIPF5Q969M3 257 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 PHF21AQ96BD5 680 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
SRP54-201ENST00000216774 FBXO34Q9NWN3 711 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 PCOLCE2Q9UKZ9 415 aa12.3□□□□□ -0.44
SRP54-201ENST00000216774 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 OGG1O15527 345 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 DNAJB6O75190 326 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 ARL6IP5O75915 188 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 TCRBP04435 133 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 DRD5P21918 477 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 ACTA2P62736 377 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 ACTG2P63267 376 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 POU6F2P78424 691 aaPredicted RBP12.29□□□□□ -0.44
SRP54-201ENST00000216774 TMEM240Q5SV17 173 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 RPTNQ6XPR3 784 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 SYS1Q8N2H4 156 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 FAM109AQ8N4B1 249 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 DTX3Q8N9I9 347 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 OR5J2Q8NH18 312 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 OR51A7Q8NH64 312 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 GPR137Q96N19 417 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 SFXN1Q9H9B4 322 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
SRP54-201ENST00000216774 B3GNT2Q9NY97 397 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 SLC23A1Q9UHI7 598 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 RNF215Q9Y6U7 377 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 SPACA6W5XKT8 324 aa12.29□□□□□ -0.44
SRP54-201ENST00000216774 TRAV6A0A075B6T7 132 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 A0A1B0GVC2 190 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 A6NIN4 97 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 NDUFB5O43674 189 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 PPP1R3DO95685 299 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CLUP10909 449 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 EPXP11678 715 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ANXA3P12429 323 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ADPRHP54922 357 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ID2Q02363 134 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 FCRLBQ6BAA4 426 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 CDH24Q86UP0 819 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 OR11H7Q8NGC8 314 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 OR51J1Q9H342 316 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
SRP54-201ENST00000216774 SERTAD3Q9UJW9 196 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 PILRAQ9UKJ1 303 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 NPIPA5A0A0B4J1W7 369 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
SRP54-201ENST00000216774 LRRN3E7EW58 273 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms