RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Defb48Q3UW22 87 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rap1bQ99JI6 184 aa11.3□□□□□ -0.6
Trim56-201ENSMUST00000054384 SparcP07214 302 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 TpoP35419 914 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Sox17Q61473 419 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 RinlQ80UW3 563 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc30a8Q8BGG0 367 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1277Q8VF41 303 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mgat2Q921V5 442 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prss52Q9D9M0 321 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rgs11Q9Z2H1 443 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Scn4aQ9ER60 1841 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tet3Q8BG87 1668 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 4930523C07RikE9Q2T4 99 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr730E9Q8M3 318 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nudt19P11930 357 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Crabp1P62965 137 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Q80UB0 333 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zdhhc14Q8BQQ1 489 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ugt2b37Q8VCN3 530 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1466Q8VFW4 310 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr410Q8VFX7 315 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr402Q8VFX8 315 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr126Q8VGF0 319 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ugt2b38Q91WH2 530 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1084A0A1L1STZ9 313 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fam84bD3YXJ5 310 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Atp5j2P56135 88 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rsrp1Q3UC65 298 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gls2Q571F8 602 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 B3gnt3Q5JCS9 372 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 OmgQ63912 440 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cd300aQ6SJQ0 318 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kyat3Q71RI9 455 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 MroQ7TNB4 248 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zbtb49Q8BXX2 756 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bpifb2Q8C1E1 462 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1208Q8VG47 308 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rbm39Q8VH51 530 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Asb18Q8VHA6 467 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm5938A2AEN9 163 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm8909G3UXE9 396 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 BdnfP21237 249 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 FurinP23188 793 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 GifP52787 417 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 CbfbQ08024 187 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem130Q6NXM3 419 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 StgQ8BM15 349 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dhrs1Q99L04 313 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cby1Q9D1C2 127 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn2r98E9PZ56 857 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Galnt1O08912 559 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 FrzbP97401 323 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Crebl2Q32M00 123 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 SctrQ5FWI2 447 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Smad2Q62432 467 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 4933402N03RikQ8CDT9 329 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem234Q8R1E7 140 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ddx1Q91VR5 740 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 AspnQ99MQ4 373 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ier3ip1Q9CR20 82 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Alkbh4Q9D8F1 300 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Syt8Q9R0N6 395 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Eif4hQ9WUK2 248 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mettl11bB2RXM4 283 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nup153E9Q3G8 1462 aaKnown RBP11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Flt3lgP49772 232 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Wdr18Q4VBE8 431 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Camk2dQ6PHZ2 499 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ly6g5cQ8K1T5 149 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 F11Q91Y47 624 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Sipa1l2Q80TE4 1722 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Phrf1A6H619 1682 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Glb1l3A2RSQ1 649 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1287Q7TQY1 305 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 SowahcQ8C0J6 512 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ssuh2Q8C3L1 340 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 0610009B22RikQ8R3W2 140 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ifi27l2bQ8VC49 283 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr672Q8VG28 312 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ms4a10Q99N03 267 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ly6kQ9CWP4 154 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r40Q9EQ46 310 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tmem176bQ9R1Q6 263 aa11.29□□□□□ -0.6
Trim56-201ENSMUST00000054384 5830473C10RikF8VQ07 620 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc43a2Q8CGA3 568 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Mitd1Q8VDV8 249 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1504Q8VFQ4 315 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Plag1Q9QYE0 499 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm10722F6VLK5 217 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 CfbP04186 761 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Kcne1P23299 129 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Thbs2Q03350 1172 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ctu2Q3U308 514 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ankub1Q3UUE9 192 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Stk-ps2Q8C0V7 499 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dnajc22Q8CHS2 339 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Treml1Q8K558 317 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Glyr1Q922P9 546 aaKnown RBP11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tram2Q924Z5 370 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms