RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 P01735 133 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Arhgef39Q66JY6 344 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Man1c1Q6NXK9 625 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Zbtb42Q811H0 420 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Uqcrc1Q9CZ13 480 aaKnown RBP15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Actr6Q9D864 396 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mrpl39Q9JKF7 336 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Slc7a11Q9WTR6 502 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gk2Q9WU65 554 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Heatr5bQ8C547 2070 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ajap1A2ALI5 412 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Scrg1O88745 98 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 AanatO88816 205 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 DmknQ6P253 517 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Tmc6Q7TN60 810 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ankrd34cQ8BLB8 534 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cdkl3Q8BLF2 595 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Fam199xQ8K2D0 388 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 SuoxQ8R086 546 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr578Q8VH17 313 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Pcdhb16Q91Y03 802 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Dcbld2Q91ZV3 769 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rcbtb2Q99LJ7 551 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 SvbpQ99LQ4 66 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 4930503E14RikQ9D583 177 aa15.72■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rpl7a-ps3A0A140T8L1 270 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Rpl7a-ps5A0A140T8L3 268 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ddx43D3Z6P9 646 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 H2-ObO35424 271 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Creg1O88668 220 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Camk2aP11798 478 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Acp2P24638 423 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Wdr20Q3UWE6 569 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Clcn4Q61418 747 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Med19Q8C1S0 244 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Gpr158Q8C419 1200 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ncr1Q8C567 325 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 SbsnQ8CIT9 700 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Med11Q9D8C6 117 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Nox4Q9JHI8 578 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sfrp5Q9WU66 314 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 FancmQ8BGE5 2021 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 EllO08856 602 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cd38P56528 304 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Csrp1P97315 193 aaKnown RBP15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Ankrd53Q3V0J4 497 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Sult2a8Q8BGL3 282 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Lypd4Q8BVP6 246 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Or51e2Q8VBV9 320 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Olfr1467Q8VFW1 308 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Mlc1Q8VHK5 382 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Stoml2Q99JB2 353 aaKnown RBP15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Cmss1Q9CZT6 276 aaKnown RBP15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 MtpapQ9D0D3 585 aaKnown RBP15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Arv1Q9D0U9 266 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Spns3Q9D232 514 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Slc22a21Q9WTN6 564 aa15.71■□□□□ 0.11
Ctcf-201ENSMUST00000005841 Trbv21A0A0A6YX06 97 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 A0A1Y7VIU7 259 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mthfd2lD3YZG8 338 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Atp6ap1lD3Z5W0 336 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp97E9PZP6 546 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp960L7N267 546 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Itm2bO89051 266 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Bpifa2P07743 235 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 TaglnP37804 201 aaKnown RBP15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Dlk1Q09163 385 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 GkQ64516 559 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cox15Q8BJ03 413 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ubqln1Q8R317 582 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr61Q8VGM2 311 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Nkd1Q99MH6 471 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mapk9Q9WTU6 423 aa15.71■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr396-ps1A0A0U1RNF5 211 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp993A2A8V4 313 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm9493F6SVV1 192 aaKnown RBP15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Rps7P62082 194 aaKnown RBP15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Nos3P70313 1202 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 GaltQ03249 379 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gsk3aQ2NL51 490 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Sidt1Q6AXF6 827 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Znf182Q6P560 627 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Timmdc1Q8BUY5 285 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mettl6Q8BVH9 282 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr828Q8VFM8 312 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1151Q8VFQ8 308 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Wdr53Q9DB94 358 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Xrn2Q9DBR1 951 aaKnown RBP15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Greb1Q3UHK3 1954 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Btg4O70552 250 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zfp27P10077 819 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cd48P18181 240 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 AboP38649 332 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fxyd2Q04646 70 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zc3h12aQ5D1E7 596 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Lrrc39Q8BGI7 337 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 MylipQ8BM54 445 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr97Q8VFE1 310 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr734Q8VFT4 313 aa15.7■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Spef1Q99JL1 234 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms