RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OR1N1Q8NGS0 311 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 C16orf52Q8NHV5 167 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 VANGL1Q8TAA9 524 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 PTPMT1Q8WUK0 201 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 MBOAT4Q96T53 435 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 APMAPQ9HDC9 416 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 PNO1Q9NRX1 252 aaKnown RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 VNN3Q9NY84 501 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 PPIEQ9UNP9 301 aaKnown RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 MAGED1Q9Y5V3 778 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 SNX5Q9Y5X3 404 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 C2orf92A0A1B0GVN3 265 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 PRAMEF25A6NGN4 478 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 VSTM2BA6NLU5 285 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 E9PQ18 207 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 IL33O95760 270 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 IGKV3-11P04433 115 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 HEXBP07686 556 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 ZGLP1P0C6A0 271 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 NAGAP17050 411 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 MAOAP21397 527 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 GGT2P36268 569 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 RBM34P42696 430 aaKnown RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 CLK3P49761 638 aaKnown RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 CRISP1P54107 249 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 NRG3P56975 720 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 SLC37A1P57057 533 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 SNRPNP63162 240 aaKnown RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 IL5RAQ01344 420 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 APOFQ13790 326 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 GANABQ14697 944 aaKnown RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 ENTPD8Q5MY95 495 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF770Q6IQ21 691 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 JMJD6Q6NYC1 403 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 ALDH16A1Q8IZ83 802 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 LSMEM1Q8N8F7 131 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 Q8NA96 180 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 OR52J3Q8NH60 311 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 PIGXQ8TBF5 258 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 STT3BQ8TCJ2 826 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 DNAJA4Q8WW22 397 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 NACC2Q96BF6 587 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 EXOSC3Q9NQT5 275 aaKnown RBP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 PLCXD1Q9NUJ7 323 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 MKL2Q9ULH7 1088 aa15.81■□□□□ 0.12
PHGDH-234ENST00000642041 NIPBLQ6KC79 2804 aaeCLIP15.81■□□□□ 0.12
PHGDH-234ENST00000642041 C9J4A7 227 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 CDC123O75794 336 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-234ENST00000642041 CT45A8P0DMV1 189 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 CT45A9P0DMV2 189 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 SLC6A8P48029 635 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 COPZ1P61923 177 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 MVKQ03426 396 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 TUBA3CQ13748 450 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 FGFBP1Q14512 234 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 SYT16Q17RD7 645 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 CT45A2Q5DJT8 189 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 SP5Q6BEB4 398 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-234ENST00000642041 PWWP2BQ6NUJ5 590 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 VRK2Q86Y07 508 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 MISPQ8IVT2 679 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 HS3ST5Q8IZT8 346 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 SVOPQ8N4V2 548 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 CLDN22Q8N7P3 220 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 AQP11Q8NBQ7 271 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 SLC2A12Q8TD20 617 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 FUZQ9BT04 418 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 IMPAD1Q9NX62 359 aa15.8■□□□□ 0.12
PHGDH-234ENST00000642041 NINQ8N4C6 2090 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 A0A1W2PQD3 144 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 IRGMA1A4Y4 181 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 M0R3H8 397 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 FFAR1O14842 300 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 ANGPTL1O95841 491 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 IGF2P01344 180 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 GNAO1P09471 354 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 TNFRSF1BP20333 461 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 SSTR4P31391 388 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 YAP1P46937 504 aaKnown RBP15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PNLIPRP2P54317 469 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 EMP2P54851 167 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 TSPAN31Q12999 210 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 CDK5R2Q13319 367 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PIN1Q13526 163 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-234ENST00000642041 MEDAGQ5VYS4 303 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF773Q6PK81 442 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 C6orf15Q6UXA7 325 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF730Q6ZMV8 503 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 ZNF836Q6ZNA1 936 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 NUBPLQ8TB37 319 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 SLC7A13Q8TCU3 470 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PIK3R3Q92569 461 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 DIO2Q92813 273 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 OSTF1Q92882 214 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 DGCR14Q96DF8 476 aaKnown RBP15.79■□□□□ 0.12
PHGDH-234ENST00000642041 SLC41A3Q96GZ6 507 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 LPAR4Q99677 370 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 VN1R1Q9GZP7 353 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 ANKRA2Q9H9E1 313 aa15.79■□□□□ 0.12
PHGDH-234ENST00000642041 PCDHGB7Q9Y5F8 929 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms