RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ADGRL4Q9HBW9 690 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 COPZ2Q9P299 210 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 KCNN3Q9UGI6 736 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SIGLEC7Q9Y286 467 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 AUP1Q9Y679 476 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 COLEC10Q9Y6Z7 277 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 RIIAD1A6NNX1 92 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 B8ZZF3 427 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC22A5O76082 557 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 GKN3PP0CG01 181 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 LAMP2P13473 410 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 BMP8BP34820 402 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 ACTC1P68032 377 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 ACTA1P68133 377 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 CD276Q5ZPR3 534 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 DMKNQ6E0U4 476 aaPredicted RBP18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 BMP8AQ7Z5Y6 402 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR2M2Q96R28 347 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 KLHL1Q9NR64 748 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 HAO2Q9NYQ3 351 aa18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 EIF3KQ9UBQ5 218 aaKnown RBP18.64■□□□□ 0.57
SYNGAP1-227ENST00000638142 DOCK9Q9BZ29 2069 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TRAV6A0A075B6T7 132 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TBC1D3EA0A087X179 549 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 A0A1B0GVC2 190 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 A0A1W2PP55 124 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 A6NIN4 97 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 J3QLW9 94 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ADH1BP00325 375 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 MRPL3P09001 348 aaKnown RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC35G6P0C7Q6 338 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF19P17023 458 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 RAB3BP20337 219 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 C5AR1P21730 350 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC2A5P22732 501 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 NDUFS1P28331 727 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 NRG3P56975 720 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF85Q03923 595 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SGCGQ13326 291 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 CAMK1Q14012 370 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 HSD17B12Q53GQ0 312 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 DCST2Q5T1A1 773 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 USP53Q70EK8 1073 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC38A6Q8IZM9 456 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR13C2Q8NGS9 318 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 HSD17B8Q92506 261 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SERINC2Q96SA4 455 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ERVMER34-1Q9H9K5 563 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 PRDM9Q9NQV7 894 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 C19orf53Q9UNZ5 99 aaPredicted RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 MED31Q9Y3C7 131 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 LAMA3Q16787 3333 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TEX51A0A1B0GUA7 166 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 CDHR4A6H8M9 788 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 UBL3O95164 117 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TCRBP04435 133 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ANXA3P12429 323 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 PEPDP12955 493 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 POU3F3P20264 500 aaPredicted RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TLX1P31314 330 aaPredicted RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SUZ12Q15022 739 aaKnown RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC25A35Q3KQZ1 300 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ACSM3Q53FZ2 586 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 TOMM5Q8N4H5 51 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SPERTQ8NA61 448 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR11H7Q8NGC8 314 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF431Q8TF32 576 aaPredicted RBP18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 BAIAP2Q9UQB8 552 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 STON1Q9Y6Q2 735 aa18.63■□□□□ 0.57
SYNGAP1-227ENST00000638142 SAGP10523 405 aaPredicted RBP18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 CPMP14384 443 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 IL9P15248 144 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF3P17036 446 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 SRP9P49458 86 aaKnown RBP18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 MMP15P51511 669 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 PITPNAQ00169 270 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 AMZ1Q400G9 498 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 TOR2AQ5JU69 321 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 TEX261Q6UWH6 196 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR4N5Q8IXE1 308 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR4C6Q8NH72 309 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 LCN9Q8WX39 176 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 SMPDL3BQ92485 455 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 YIPF5Q969M3 257 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 CLIP3Q96DZ5 547 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR51J1Q9H342 316 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZFP64Q9NPA5 681 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 U3KQ87 197 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 TRAV1-2A0A0B4J238 106 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 BTN3A3O00478 584 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 TSC22D2O75157 780 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 KAT7O95251 611 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 NOS3P29474 1203 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 ACVR1BP36896 505 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR12D2P58182 307 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 RPS21P63220 83 aaKnown RBP18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 SIM1P81133 766 aaPredicted RBP18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 POU4F2Q12837 409 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 EXOSC6Q5RKV6 272 aaKnown RBP18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 LYPD4Q6UWN0 246 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms