RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KIRREL3Q8IZU9 778 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 OR5W2Q8NH69 310 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 ROPN1LQ96C74 230 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 NEURL3Q96EH8 262 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 MAELQ96JY0 434 aaKnown RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 THUMPD3Q9BV44 507 aaKnown RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 BTNL2Q9UIR0 455 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 MCTS1Q9ULC4 181 aaKnown RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 IGHV3-15A0A0B4J1V0 119 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 CCDC154A6NI56 674 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 DUXAA6NLW8 204 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 TRPC5OSA6NMA1 111 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 HMGN4O00479 90 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ADAM11O75078 769 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 SS18L1O75177 396 aaPredicted RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 SYNGR4O95473 234 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 PLGP00747 810 aaPredicted RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 CSTAP01040 98 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 PGRP06401 933 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 CD8BP10966 210 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 FCGR2AP12318 317 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ELK4P28324 431 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 UGT2B10P36537 528 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 KHKP50053 298 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 SLC18A1P54219 525 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 EEF1A1P68104 462 aaKnown RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 CHRNEQ04844 493 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ZNF239Q16600 458 aaKnown RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 DPY19L1Q2PZI1 675 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 TMEM176BQ3YBM2 270 aaPredicted RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 EEF1A1P5Q5VTE0 462 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ATG16L1Q676U5 607 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 SPNS3Q6ZMD2 512 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ANKFN1Q8N957 763 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 OR9I1Q8NGQ6 314 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 DNAJA3Q96EY1 480 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ZC3HAV1LQ96H79 300 aaKnown RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 OR52E6Q96RD3 313 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 PANX1Q96RD7 426 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 C12orf49Q9H741 205 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 PLEKHF2Q9H8W4 249 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 EXD2Q9NVH0 621 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 WDR45Q9Y484 360 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 GPC6Q9Y625 555 aaPredicted RBP15.84■□□□□ 0.13
PNKP-230ENST00000638016 ITPR3Q14573 2671 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 ROS1P08922 2347 aa15.84■□□□□ 0.13
PNKP-230ENST00000638016 H6PDO95479 791 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 AK1P00568 194 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 CHRM4P08173 479 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 AGTR1P30556 359 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 PGM1P36871 562 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 EIF1P41567 113 aaKnown RBP15.83■□□□□ 0.12
PNKP-230ENST00000638016 CARD18P57730 90 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 SYPL1Q16563 259 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 GTDC1Q4AE62 458 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 GPAT3Q53EU6 434 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 TTMPQ5BVD1 217 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 PAMR1Q6UXH9 720 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 ZNF619Q8N2I2 560 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 VPS37AQ8NEZ2 397 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 TOR1AIP2Q8NFQ8 470 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 ZNF75CPQ92670 426 aaPredicted RBP15.83■□□□□ 0.12
PNKP-230ENST00000638016 GMPPAQ96IJ6 420 aaPredicted RBP15.83■□□□□ 0.12
PNKP-230ENST00000638016 KLHL4Q9C0H6 718 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 LAT2Q9GZY6 243 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 HHATLQ9HCP6 504 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 STOML1Q9UBI4 398 aa15.83■□□□□ 0.12
PNKP-230ENST00000638016 ACANP16112 2415 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 DEFB108AA8MXU0 73 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 EIF4E2O60573 245 aaKnown RBP15.82■□□□□ 0.12
PNKP-230ENST00000638016 SOX30O94993 753 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 ENPP1P22413 925 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 CTBP2P56545 445 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 SESN3P58005 492 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 CBFBQ13951 182 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 FGFBP1Q14512 234 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 TIGD2Q4W5G0 525 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 SLC25A53Q5H9E4 307 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 ATAD3BQ5T9A4 648 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 ZNF621Q6ZSS3 439 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 NUFIP2Q7Z417 695 aaKnown RBP15.82■□□□□ 0.12
PNKP-230ENST00000638016 FAM71CQ8NEG0 241 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 OR6K3Q8NGY3 331 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 RAB3IL1Q8TBN0 382 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 RNF128Q8TEB7 428 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 ZFP90Q8TF47 636 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 MRGPRX4Q96LA9 322 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 HS3ST6Q96QI5 342 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 MED18Q9BUE0 208 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 SLCO1B3Q9NPD5 702 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 EMC9Q9Y3B6 208 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 MTORP42345 2549 aa15.82■□□□□ 0.12
PNKP-230ENST00000638016 C16orf97H3BN30 126 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 DIAPH2O60879 1101 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 DNAJA2O60884 412 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 ADH6P28332 368 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 RYKP34925 604 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 SELENBP1Q13228 472 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 PDCD4Q53EL6 469 aaKnown RBP15.81■□□□□ 0.12
PNKP-230ENST00000638016 AGBL2Q5U5Z8 902 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms