RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 GPR19Q15760 415 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 INTS12Q96CB8 462 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 SSUH2Q9Y2M2 353 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 BMI1P35226 326 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 CLDN6P56747 220 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 COL13A1Q5TAT6 717 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 CES4AQ5XG92 561 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 TPRG1Q6ZUI0 275 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 ANKUB1A6NFN9 424 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 RGS11O94810 467 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 MRPL19P49406 292 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 TMEM244Q5VVB8 128 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 MKXQ8IYA7 352 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 C4BPAP04003 597 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 OR10J4P0C629 311 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ZFAND4Q86XD8 727 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 HAS1Q92839 578 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ZNF587BE7ETH6 402 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 KIAA0355O15063 1070 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SEC14L5O43304 696 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ARL2P36404 184 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 LILRB4Q8NHJ6 448 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SLC16A6O15403 523 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 CPN1P15169 458 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 GABRA4P48169 554 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 LSAMPQ13449 338 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SFRP4Q6FHJ7 346 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 OR2T11Q8NH01 316 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 PWWP2AQ96N64 755 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 QRSL1Q9H0R6 528 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 UBIAD1Q9Y5Z9 338 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 PTPRUQ92729 1446 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 CSKP41240 450 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 PXT1Q8NFP0 134 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 INTS14Q96SY0 518 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ENKD1Q9H0I2 346 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 CHRDQ9H2X0 955 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 DCAF16Q9NXF7 216 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ACTL7AQ9Y615 435 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SPTAN1Q13813 2472 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 WNT10BO00744 389 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 ZNF623O75123 536 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 MPIG6BO95866 241 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 USF1P22415 310 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SUOXP51687 545 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 PPP2CAP67775 309 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 TMEM97Q5BJF2 176 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 IL22RA1Q8N6P7 574 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 SOX7Q9BT81 388 aa18.27■□□□□ 0.52
CACNA1A-257ENST00000638009 C8AP07357 584 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 ZNF728P0DKX0 622 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 ENPP1P22413 925 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 ZNF133P52736 654 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 RPL10LQ96L21 214 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 MRIQ9BWK5 157 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 BABAM2Q9NXR7 383 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 PCDHA9Q9Y5H5 950 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 ADAM11O75078 769 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 POP7O75817 140 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 CDK5Q00535 292 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 NOGQ13253 232 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 ENDOGQ14249 297 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 LCN10Q6JVE6 187 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 SENP5Q96HI0 755 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 KREMEN1Q96MU8 473 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 VAPAQ9P0L0 249 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 POLLQ9UGP5 575 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 OR1A2Q9Y585 309 aa18.27■□□□□ 0.51
CACNA1A-257ENST00000638009 GPR4P46093 362 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 MBLAC2Q68D91 279 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 PLAG1Q6DJT9 500 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 Q6ZRG5 221 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 MS4A4EQ96PG1 132 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 UBR2Q8IWV8 1755 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 OR8U8P0C7N1 319 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 TEKQ02763 1124 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 IL34Q6ZMJ4 242 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 CCDC116Q8IYX3 515 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 C2CD4AQ8NCU7 369 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 ZNF582Q96NG8 517 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 LOC730098B7Z3J9 87 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SLC35A2P78381 396 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SFT2D3Q587I9 215 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 GMEB2Q9UKD1 530 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 ETV7Q9Y603 341 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 TMEM82A0PJX8 343 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 IL2RGP31785 369 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 WASP42768 502 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 IL1F10Q8WWZ1 152 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 TMEM18Q96B42 140 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 CBLP22681 906 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 GJA5P36382 358 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 OR4D2P58180 307 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 SLC35F2Q8IXU6 374 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 EID2Q8N6I1 236 aa18.26■□□□□ 0.51
CACNA1A-257ENST00000638009 TM7SF3Q9NS93 570 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms