RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SH3D21A4FU49 640 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 UGT2B17O75795 530 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 ANP32DO95626 131 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 KRT75O95678 551 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 UBTFL6P0CB48 400 aaPredicted RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 POU2F1P14859 743 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 PRKCAP17252 672 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 IL11P20809 199 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 CDKN2CP42773 168 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 SLC6A8P48029 635 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 TXNL4AP83876 142 aaKnown RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 QPRTQ15274 297 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 TOMM34Q15785 309 aaPredicted RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 CTU2Q2VPK5 515 aaKnown RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 FAM214BQ7L5A3 538 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 MAVSQ7Z434 540 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 ZNF619Q8N2I2 560 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 MIER2Q8N344 545 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 ARSGQ96EG1 525 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 ADGRG7Q96K78 797 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 MRGPRX4Q96LA9 322 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 OR52B2Q96RD2 323 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 RMND5AQ9H871 391 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.38□□□□□ -0.43
PNKP-228ENST00000637325 ZIM2Q9NZV7 527 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 SLC35A3Q9Y2D2 325 aa12.38□□□□□ -0.43
PNKP-228ENST00000637325 HMGN4O00479 90 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 POLR3GO15318 223 aaPredicted RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 KIAA0513O60268 411 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 GUSBP08236 651 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 PABPC4LP0CB38 370 aaKnown RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 NR2F1P10589 423 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 PGCP20142 388 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 SLC7A1P30825 629 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 CD79BP40259 229 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 POLR2JP52435 117 aaKnown RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 STX1BP61266 288 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 CHRNEQ04844 493 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 SELENBP1Q13228 472 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 PNPT1Q8TCS8 783 aaKnown RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 OIT3Q8WWZ8 545 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 TMEM234Q8WY98 164 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 ROBO4Q8WZ75 1007 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 NRGNQ92686 78 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 C7orf26Q96N11 449 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 GLRX2Q9NS18 164 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 KCNE5Q9UJ90 142 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
PNKP-228ENST00000637325 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
PNKP-228ENST00000637325 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 FAM221AA4D161 298 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 HMGB1P1B2RPK0 211 aaPredicted RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 EFNA2O43921 213 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 H6PDO95479 791 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 CD8BP10966 210 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 SHC1P29353 583 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 DNAJA1P31689 397 aaKnown RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 FUT5Q11128 374 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 SKP2Q13309 424 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 MAPK14Q16539 360 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 EXOC3L2Q2M3D2 409 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 TIGD2Q4W5G0 525 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 DNAJC14Q6Y2X3 702 aaPredicted RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 FRRS1Q6ZNA5 592 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 HMGN2P46Q86SG4 172 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 ST8SIA1Q92185 356 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 ITCHQ96J02 903 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 TRNT1Q96Q11 434 aaKnown RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 SAP130Q9H0E3 1048 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 SLCO1B3Q9NPD5 702 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 SDR39U1Q9NRG7 319 aaPredicted RBP12.36□□□□□ -0.43
PNKP-228ENST00000637325 SERINC1Q9NRX5 453 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 ROS1P08922 2347 aa12.36□□□□□ -0.43
PNKP-228ENST00000637325 DSCAMO60469 2012 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 HRNRQ86YZ3 2850 aaPredicted RBP12.35□□□□□ -0.43
PNKP-228ENST00000637325 FAM234BA2RU67 622 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 C16orf97H3BN30 126 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 SS18L1O75177 396 aaPredicted RBP12.35□□□□□ -0.43
PNKP-228ENST00000637325 GOSR1O95249 250 aa12.35□□□□□ -0.43
PNKP-228ENST00000637325 TGDSO95455 350 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms