RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 EPSTI1Q96J88 318 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PIWIL1Q96J94 861 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 C12orf42Q96LP6 360 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SIGLEC12Q96PQ1 595 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPAN18Q96SJ8 248 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM173AQ9BQD7 235 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TSSK1BQ9BXA7 367 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GPR174Q9BXC1 333 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MRPL9Q9BYD2 267 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NLNQ9BYT8 704 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM9Q9C026 710 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM4Q9C037 500 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GLT8D2Q9H1C3 349 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CXCL16Q9H2A7 254 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 POMKQ9H5K3 350 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PTGES2Q9H7Z7 377 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 VCPKMTQ9H867 229 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 Q9HAA7 133 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MAGEF1Q9HAY2 307 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 AMBNQ9NP70 447 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MIEF1Q9NQG6 463 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ACOXLQ9NUZ1 547 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ARGLU1Q9NWB6 273 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SENP1Q9P0U3 644 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TUBGCP4Q9UGJ1 667 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC2A6Q9UGQ3 507 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CIDEBQ9UHD4 219 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM153AQ9UHL3 310 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MAD2L2Q9UI95 211 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 KLHL21Q9UJP4 597 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 EMCNQ9ULC0 261 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CCPG1Q9ULG6 757 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 LIPT1Q9Y234 373 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GINS2Q9Y248 185 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FOXA2Q9Y261 457 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TDRKHQ9Y2W6 561 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ACACBO00763 2458 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CFAP54Q96N23 3096 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TANC2Q9HCD6 1990 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MYO15AQ9UKN7 3530 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 BPTFQ12830 3046 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF292O60281 2723 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CNTRLQ7Z7A1 2325 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KNL1Q8NG31 2342 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PCNX1Q96RV3 2341 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IGHV3OR16-12A0A075B7B8 117 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 A0A0A6YYD4 124 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NPIPA5A0A0B4J1W7 369 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 A0A1W2PQ72 361 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM110-MUSTN1A8MSY1 372 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HIDE1A8MVS5 230 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM220BPB1ANY3 271 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NPIPA5E9PKD4 350 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 H3BMH7 237 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 I3L4J1 428 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 E2F3O00716 465 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CXCL11O14625 94 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CASKO14936 926 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HDAC3O15379 428 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CHMP2AO43633 222 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TYROBPO43914 113 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 FMO6PO60774 539 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KERAO60938 352 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SDC3O75056 442 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 N4BP1O75113 896 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SURF6O75683 361 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DUSP14O95147 198 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 LYPD3O95274 346 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SYNGR4O95473 234 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IGSF6O95976 241 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 OAS1P00973 400 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TIMP1P01033 207 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IGHG3P01860 377 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 LGALS2P05162 132 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DCNP07585 359 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 APRTP07741 180 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ASNSP08243 561 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IGFBP1P08833 259 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 H2AFZP0C0S5 128 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GSTT2P0CG29 244 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GSTT2BP0CG30 244 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SMIM10L2AP0DMW4 78 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SMIM10L2BP0DMW5 78 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC192P0DO97 292 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 LAMP1P11279 417 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CYP11B1P15538 503 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SDC1P18827 310 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPAN8P19075 237 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PSMB1P20618 241 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CYP3A5P20815 502 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HOXD10P28358 340 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PTPN4P29074 926 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CD52P31358 61 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IL2RGP31785 369 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 UGT1A3P35503 534 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NPY2RP49146 381 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC26A2P50443 739 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms