RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 STX1AQ16623 288 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 GUK1Q16774 197 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM249Q2WGJ8 235 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 COX19Q49B96 90 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ACCSLQ4AC99 568 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LINC01620Q4KN68 170 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LACTB2Q53H82 288 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FAM46CQ5VWP2 391 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LIPKQ5VXJ0 399 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LIPJQ5W064 366 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 OR4F3Q6IEY1 312 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 OR52W1Q6IF63 320 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF770Q6IQ21 691 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ANKRD26P1Q6NSI1 321 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 APOBEC3HQ6NTF7 200 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 REEP3Q6NUK4 255 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LRRC31Q6UY01 552 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 RFPL4BQ6ZWI9 263 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MON1BQ7L1V2 547 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MEPCEQ7L2J0 689 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 H2BFWTQ7Z2G1 175 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 P4HA3Q7Z4N8 544 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 HAPLN4Q86UW8 402 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 KCNMB4Q86W47 210 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 PARGQ86W56 976 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SERPINA9Q86WD7 417 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TMPRSS12Q86WS5 348 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CRLF3Q8IUI8 442 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 APLFQ8IW19 511 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ADHFE1Q8IWW8 467 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 BOD1L2Q8IYS8 172 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CYP4Z2PQ8N1L4 340 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ELMOD1Q8N336 334 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SCCPDHQ8NBX0 429 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CHDHQ8NE62 594 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 B3GNT7Q8NFL0 401 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 STXBP6Q8NFX7 210 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 OR5B17Q8NGF7 314 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 OR51G2Q8NGK0 314 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 WDR36Q8NI36 951 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SPPL2AQ8TCT8 520 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MRAPQ8TCY5 172 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FAM222BQ8WU58 562 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TMEM239Q8WW34 195 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ADAMTS14Q8WXS8 1223 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 AP3S1Q92572 193 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FRAT1Q92837 279 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ERGIC1Q969X5 290 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FAM131CQ96AQ9 280 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 C8orf44Q96CB5 159 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MTERF3Q96E29 417 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CELF6Q96J87 481 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SGK494Q96LW2 274 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 HARBI1Q96MB7 349 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 VSTM2LQ96N03 204 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 GUCD1Q96NT3 240 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SERPINB11Q96P15 392 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TNFRSF13CQ96RJ3 184 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 GFM1Q96RP9 751 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MCCC1Q96RQ3 725 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 DDOQ99489 341 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TEAD3Q99594 435 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FUCA2Q9BTY2 467 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MCRIP2Q9BUT9 160 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MAP1LC3CQ9BXW4 147 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 BCL2L14Q9BZR8 327 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 SLC39A8Q9C0K1 460 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 MIS12Q9H081 205 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ASB7Q9H672 318 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 PPP1R3EQ9H7J1 279 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CDH20Q9HBT6 801 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ZDHHC4Q9NPG8 344 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ACOXLQ9NUZ1 547 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 NECAP2Q9NVZ3 263 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 CISD1Q9NZ45 108 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 IL36RNQ9UBH0 155 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 LRWD1Q9UFC0 647 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF346Q9UL40 294 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ABT1Q9ULW3 272 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF337Q9Y3M9 751 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 FAM32AQ9Y421 112 aaKnown RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF175Q9Y473 711 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 GMPPBQ9Y5P6 360 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 TSSC4Q9Y5U2 329 aaPredicted RBP2.65□□□□□ -1.99
PSPC1-208ENST00000635562 PTPRCP08575 1304 aa2.65□□□□□ -1.99
PSPC1-208ENST00000635562 ABCC11Q96J66 1382 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 ANKRD30BQ9BXX2 1392 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 RAB3GAP2Q9H2M9 1393 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 VIRMAQ69YN4 1812 aaKnown RBP2.64□□□□□ -1.99
PSPC1-208ENST00000635562 A0A0J9YVX5 310 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 A0A1B0GTI1 187 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 KBTBD11-OT1A0A1B0GTJ5 212 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF233A6NK53 670 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 CCT8L1PA6NM43 557 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 OR2AT4A6NND4 320 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 ZNF487B1APH4 448 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 INAFM1C9JVW0 142 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 E7EWF7 191 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 CHEK1O14757 476 aa2.64□□□□□ -1.99
PSPC1-208ENST00000635562 SIVA1O15304 175 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms