RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ANKRD30BLA7E2S9 258 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 TRAF3IP2O43734 574 aaPredicted RBP2.07□□□□□ -2.08
VBP1-204ENST00000625964 DUX1O43812 170 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 TOM1L1O75674 476 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 GCFC2P16383 781 aaKnown RBP2.07□□□□□ -2.08
VBP1-204ENST00000625964 MAGEA5P43359 124 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 PPOXP50336 477 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 APOC4P55056 127 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 ATF7IP2Q5U623 682 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 ASPHD2Q6ICH7 369 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 WDR74Q6RFH5 385 aaPredicted RBP2.07□□□□□ -2.08
VBP1-204ENST00000625964 ARIH2OSQ8N7S6 290 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 BCORP1Q8N888 145 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 SUMF2Q8NBJ7 301 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 OR52I1Q8NGK6 324 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 OR1E3Q8WZA6 343 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 STARD4Q96DR4 205 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 HPDLQ96IR7 371 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 SAMD8Q96LT4 415 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 OR5B2Q96R09 309 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 ARHGDIGQ99819 225 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 SLC30A2Q9BRI3 323 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 NXF3Q9H4D5 531 aaKnown RBP2.07□□□□□ -2.08
VBP1-204ENST00000625964 SOHLH2Q9NX45 425 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 RNF6Q9Y252 685 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 CACNG2Q9Y698 323 aa2.07□□□□□ -2.08
VBP1-204ENST00000625964 PARD3Q8TEW0 1356 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 NCOA1Q15788 1441 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 AKNAQ7Z591 1439 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 H3BMQ9 156 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 NPIPB7O75200 414 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 KLF8O95600 359 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 INSP01308 110 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 MT-ND3P03897 115 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 CLUP10909 449 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ADSSP30520 456 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ATP6V1E1P36543 226 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 CTRLP40313 264 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 BDKRB1P46663 353 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ATXN3P54252 364 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 EBI3Q14213 229 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ATXN7L3Q14CW9 347 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 NDUFA9Q16795 377 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ADPRMQ3LIE5 342 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 DNAJC21Q5F1R6 531 aaKnown RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 PAGE3Q5JUK9 113 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 LIPNQ5VXI9 398 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 UNQ9370/PRO34162Q6UXP9 181 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ANKRD37Q7Z713 158 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 NRMQ8IXM6 262 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 LINC01561Q8N1V8 128 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 NEIL3Q8TAT5 605 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 DNAJA4Q8WW22 397 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 SLC5A11Q8WWX8 675 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 MYDGFQ969H8 173 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 C14orf79Q96F83 325 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 SRXN1Q9BYN0 137 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 MAGT1Q9H0U3 335 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 MMP26Q9NRE1 261 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 BTNL2Q9UIR0 455 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 ZNF223Q9UK11 482 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 PRG3Q9Y2Y8 225 aaPredicted RBP2.06□□□□□ -2.08
VBP1-204ENST00000625964 WSB1Q9Y6I7 421 aa2.06□□□□□ -2.08
VBP1-204ENST00000625964 SRCAPQ6ZRS2 3230 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 FANCAO15360 1455 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 TTC21BQ7Z4L5 1316 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 PTPRKQ15262 1439 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 CUL7Q14999 1698 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 CFAP43Q8NDM7 1665 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 TRBV6-6A0A0A6YYG2 114 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 RNF103-CHMP3A0A140T963 221 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 PSMB11A5LHX3 300 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 A8MUA0 341 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 IGHV4-34P06331 123 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 ALOX5P09917 674 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 CCNCP24863 283 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 NMT1P30419 496 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 AXLP30530 894 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 NUDT1P36639 197 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 DLSTP36957 453 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 RPS10P46783 165 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 NAPAP54920 295 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 UNC119Q13432 240 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 ARFRP1Q13795 201 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 LAGE3Q14657 143 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 NSDHLQ15738 373 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 MAPK6Q16659 721 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 RAET1GQ6H3X3 334 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 ACSM5Q6NUN0 579 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 RNF165Q6ZSG1 346 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 APTXQ7Z2E3 356 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 ERASQ7Z444 233 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 VRK2Q86Y07 508 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 MISPQ8IVT2 679 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 OR5AU1Q8NGC0 362 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 CELF6Q96J87 481 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 VPS35Q96QK1 796 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 DUSP16Q9BY84 665 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms