RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PM20D2Q8IYS1 436 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 FBXO27Q8NI29 283 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF563Q8TA94 476 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 RELTQ969Z4 430 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 NPAS1Q99742 590 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 TP63Q9H3D4 680 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-245ENST00000621399 SPAG4Q9NPE6 437 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 ADA2Q9NZK5 511 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 POLEQ07864 2286 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 ELOVL7A1L3X0 281 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 FIGNL2A6NMB9 653 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 H3BML4 177 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 GCM2O75603 506 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-245ENST00000621399 MFN2O95140 757 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 PEPDP12955 493 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 UQCRBP14927 111 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 CPN1P15169 458 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 LHX2P50458 406 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 SRYQ05066 204 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 VEZF1Q14119 521 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 DHRS4L2Q6PKH6 230 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 TRPM8Q7Z2W7 1104 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 FJX1Q86VR8 437 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 GRAMD2AQ8IUY3 354 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 MICU2Q8IYU8 434 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 POC1BQ8TC44 478 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 TMEM234Q8WY98 164 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 ST8SIA1Q92185 356 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF524Q96C55 264 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 WDYHV1Q96HA8 205 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 MRGPRX4Q96LA9 322 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 PRDM14Q9GZV8 571 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 ALG2Q9H553 416 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 NDE1Q9NXR1 346 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 STOML1Q9UBI4 398 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 SLC5A6Q9Y289 635 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 CHST2Q9Y4C5 530 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF407Q9C0G0 2248 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 FLNCQ14315 2725 aa16.79■□□□□ 0.28
CIRBP-245ENST00000621399 RELNP78509 3460 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 AP3D1O14617 1153 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 TPST1O60507 370 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ADAM11O75078 769 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 WDR1O75083 606 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 OPN1SWP03999 348 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 GKN3PP0CG01 181 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 GP1BBP13224 206 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 GABRA1P14867 456 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ACVR2AP27037 513 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ADH6P28332 368 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 IDH2P48735 452 aaKnown RBP16.78■□□□□ 0.28
CIRBP-245ENST00000621399 EEFSECP57772 596 aaKnown RBP16.78■□□□□ 0.28
CIRBP-245ENST00000621399 SESN3P58005 492 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 DMTNQ08495 405 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 BCL2A1Q16548 175 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 C16orf89Q6UX73 402 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 CCDC80Q76M96 950 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF550Q7Z398 422 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 UBQLNLQ8IYU4 475 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 PGAM4Q8N0Y7 254 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 EID3Q8N140 333 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 SMYD1Q8NB12 490 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 BHLHE22Q8NFJ8 381 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-245ENST00000621399 SLC26A7Q8TE54 656 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 SMPDL3BQ92485 455 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 RSPO3Q9BXY4 272 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ACER3Q9NUN7 267 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 TMEM181Q9P2C4 612 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 GMPR2Q9P2T1 348 aaKnown RBP16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ABCD2Q9UBJ2 740 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 SLC13A4Q9UKG4 626 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 MEMO1Q9Y316 297 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 AP4B1Q9Y6B7 739 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 MAST4O15021 2626 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 ESPL1Q14674 2120 aa16.78■□□□□ 0.28
CIRBP-245ENST00000621399 AHRRA9YTQ3 701 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 B2RBV5 119 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 E9PLN8 166 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 H0Y3Z8 333 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 SEMA7AO75326 666 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 HOXD4P09016 255 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF708P17019 499 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 CALB2P22676 271 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 ME2P23368 584 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 PSMA4P25789 261 aaKnown RBP16.77■□□□□ 0.28
CIRBP-245ENST00000621399 GSK3BP49841 420 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 CLDN18P56856 261 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 EPS8Q12929 822 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.281e-11■■■■■ 56.7
CIRBP-245ENST00000621399 SLC25A53Q5H9E4 307 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 ZGRF1Q86YA3 2104 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 MEIOBQ8N635 442 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 KCTD14Q9BQ13 255 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-245ENST00000621399 VKORC1Q9BQB6 163 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 PINK1Q9BXM7 581 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms