RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 AIG1Q9NVV5 245 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 EDARQ9UNE0 448 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 GPC6Q9Y625 555 aaPredicted RBP15.34■□□□□ 0.05
HMGN3-203ENST00000620514 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 SNNO75324 88 aaPredicted RBP15.33■□□□□ 0.04
HMGN3-203ENST00000620514 BCAS1O75363 584 aaPredicted RBP15.33■□□□□ 0.04
HMGN3-203ENST00000620514 CYP7B1O75881 506 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 KITP10721 976 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 CRYGSP22914 178 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 ADH6P28332 368 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 EPHA3P29320 983 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 MAGOHP61326 146 aaKnown RBP15.33■□□□□ 0.04
HMGN3-203ENST00000620514 SKP2Q13309 424 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 ZNF239Q16600 458 aaKnown RBP15.33■□□□□ 0.04
HMGN3-203ENST00000620514 TGIF2LYQ8IUE0 185 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 VPS37AQ8NEZ2 397 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 TOR1AIP2Q8NFQ8 470 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 ABHD3Q8WU67 409 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 NEURL3Q96EH8 262 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 SLC35A5Q9BS91 424 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 THUMPD3Q9BV44 507 aaKnown RBP15.33■□□□□ 0.04
HMGN3-203ENST00000620514 LAT2Q9GZY6 243 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 C12orf49Q9H741 205 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 EXD2Q9NVH0 621 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 THAP1Q9NVV9 213 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 HEATR5AQ86XA9 2040 aa15.33■□□□□ 0.04
HMGN3-203ENST00000620514 PRAMEF27A3QJZ7 478 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 HDAC3O15379 428 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 KIAA0513O60268 411 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 UBTFL6P0CB48 400 aaPredicted RBP15.32■□□□□ 0.04
HMGN3-203ENST00000620514 AGTR1P30556 359 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 CHI3L1P36222 383 aaPredicted RBP15.32■□□□□ 0.04
HMGN3-203ENST00000620514 CDKN2CP42773 168 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 CBFBQ13951 182 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 DPY19L1Q2PZI1 675 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 DEFB113Q30KQ7 82 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 SLC25A53Q5H9E4 307 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 TYW3Q6IPR3 259 aaKnown RBP15.32■□□□□ 0.04
HMGN3-203ENST00000620514 SPATA19Q7Z5L4 167 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 HMGN2P46Q86SG4 172 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 RNF128Q8TEB7 428 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 ROPN1LQ96C74 230 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 TLCD1Q96CP7 247 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 PIK3IP1Q96FE7 263 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 CCDC115Q96NT0 180 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 ALPK1Q96QP1 1244 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 INPP5KQ9BT40 448 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 TMUB1Q9BVT8 246 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 QRSL1Q9H0R6 528 aaKnown RBP15.32■□□□□ 0.04
HMGN3-203ENST00000620514 TMBIM4Q9HC24 238 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 GLRX2Q9NS18 164 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 ZNF226Q9NYT6 803 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 BTNL2Q9UIR0 455 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 GPR45Q9Y5Y3 372 aa15.32■□□□□ 0.04
HMGN3-203ENST00000620514 A0A1W2PNR3 127 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 GJE1A6NN92 205 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 ETV2O00321 342 aaPredicted RBP15.31■□□□□ 0.04
HMGN3-203ENST00000620514 DNAJA2O60884 412 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 CSTAP01040 98 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 THBDP07204 575 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 CD99P14209 185 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 CD53P19397 219 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 KHKP50053 298 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 SELENBP1Q13228 472 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 TIGD2Q4W5G0 525 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 BEND6Q5SZJ8 279 aaPredicted RBP15.31■□□□□ 0.04
HMGN3-203ENST00000620514 ATAD3BQ5T9A4 648 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 STAC2Q6ZMT1 411 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 FRRS1Q6ZNA5 592 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 NUFIP2Q7Z417 695 aaKnown RBP15.31■□□□□ 0.04
HMGN3-203ENST00000620514 TUSC5Q8IXB3 177 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 ZFP90Q8TF47 636 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 CPNE4Q96A23 557 aaPredicted RBP15.31■□□□□ 0.04
HMGN3-203ENST00000620514 ZG16BQ96DA0 208 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 MARK4Q96L34 752 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 WDR45Q9Y484 360 aa15.31■□□□□ 0.04
HMGN3-203ENST00000620514 IGHV3-15A0A0B4J1V0 119 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 H6PDO95479 791 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 AGR2O95994 175 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 GSNP06396 782 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 KLK2P20151 261 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 ENPP1P22413 925 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 LOXP28300 417 aaPredicted RBP15.3■□□□□ 0.04
HMGN3-203ENST00000620514 PGM1P36871 562 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 SLC18A1P54219 525 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 SESN3P58005 492 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 PLAURQ03405 335 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 SLC9B1Q4ZJI4 515 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 NXNQ6DKJ4 435 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 GTF2IRD2BQ6EKJ0 949 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 EIF3MQ7L2H7 374 aaKnown RBP15.3■□□□□ 0.04
HMGN3-203ENST00000620514 FCRLAQ7L513 359 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 MAVSQ7Z434 540 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 GTF2IRD2Q86UP8 949 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 LSRQ86X29 649 aaPredicted RBP15.3■□□□□ 0.04
HMGN3-203ENST00000620514 RNF130Q86XS8 419 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 REXO5Q96IC2 774 aaKnown RBP15.3■□□□□ 0.04
HMGN3-203ENST00000620514 OR52E6Q96RD3 313 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms