RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CHMP24386 653 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 CHI3L1P36222 383 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 DCTP40126 519 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 STARP49675 285 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 LHX2P50458 406 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ATP12AP54707 1039 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 NUP107P57740 925 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 STX1BP61266 288 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 IRX1P78414 480 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF117Q03924 483 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 PMPCAQ10713 525 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF141Q15928 474 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 MAPK14Q16539 360 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 GLYR1Q49A26 553 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 GTDC1Q4AE62 458 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 PAGE3Q5JUK9 113 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 C1orf185Q5T7R7 199 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 METTL21CQ5VZV1 264 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 HIST2H2BCQ6DN03 193 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 TMEM211Q6ICI0 200 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 TYW3Q6IPR3 259 aaKnown RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 TNFAIP8L2Q6P589 184 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 XKRXQ6PP77 449 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 VHLLQ6RSH7 139 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 CBLN3Q6UW01 205 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ARSKQ6UWY0 536 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 RPTNQ6XPR3 784 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 MAMDC2Q7Z304 686 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 IFNEQ86WN2 208 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 MSRB3Q8IXL7 192 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ULK2Q8IYT8 1036 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF808Q8N4W9 903 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 TRIML2Q8N7C3 387 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ANKFN1Q8N957 763 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 GATSQ8NAP1 163 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 OR4K17Q8NGC6 315 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 PNPT1Q8TCS8 783 aaKnown RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 XAGE5Q8WWM1 108 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ABTB1Q969K4 478 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF524Q96C55 264 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ROPN1LQ96C74 230 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZG16BQ96DA0 208 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 C1GALT1C1Q96EU7 318 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ITCHQ96J02 903 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF317Q96PQ6 595 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 NPAS1Q99742 590 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 TMEM120AQ9BXJ8 343 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 NMUR2Q9GZQ4 415 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF350Q9GZX5 532 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 PTGES2Q9H7Z7 377 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 RMND5AQ9H871 391 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 EXD2Q9NVH0 621 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 FGFR1OP2Q9NVK5 253 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ERVK13-1Q9NX77 482 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ALKBH4Q9NXW9 302 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 SLC25A37Q9NYZ2 338 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 MKLN1Q9UL63 735 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ICAM5Q9UMF0 924 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 RPH3AQ9Y2J0 694 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 SF3B6Q9Y3B4 125 aaKnown RBP5.89□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF337Q9Y3M9 751 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 DTNAQ9Y4J8 743 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 HIVEP3Q5T1R4 2406 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 KIAA1549Q9HCM3 1950 aa5.89□□□□□ -1.47
BRCC3-209ENST00000620502 NBASA2RRP1 2371 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 A0A096LPI6 279 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TRBV5-3A0A0A0MS03 114 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 A0A0G2JNJ9 132 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 A0A1W2PP18 115 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 OR2M5A3KFT3 312 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 EFNA2O43921 213 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 GMFGO60234 142 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 KIAA0513O60268 411 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 KRT75O95678 551 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 VIMP08670 466 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 HOXD4P09016 255 aaPredicted RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TFPTP0C1Z6 253 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ETFAP13804 333 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 GABRA1P14867 456 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 HPGDP15428 266 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF708P17019 499 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TCEA1P23193 301 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 PSMA4P25789 261 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 DNAJA1P31689 397 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 PTGER4P35408 488 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 MAGEA8P43361 318 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 KHKP50053 298 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SMSP52788 366 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ARFIP2P53365 341 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SUCLG1P53597 346 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 CLDN15P56746 228 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 CLDN18P56856 261 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TXNL4AP83876 142 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ART3Q13508 389 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SQLEQ14534 574 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 GANABQ14697 944 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms