RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SUMO3P55854 103 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TAS2R41P59536 307 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 COPZ1P61923 177 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ARG2P78540 354 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ST3GAL3Q11203 375 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 CBFBQ13951 182 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 GK3PQ14409 553 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 INPP5JQ15735 1006 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TBR1Q16650 682 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 COL28A1Q2UY09 1125 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 COLEC12Q5KU26 742 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PRAMEF20Q5VT98 475 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TIGD3Q6B0B8 471 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 WBP2NLQ6ICG8 309 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 OR5M10Q6IEU7 315 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF613Q6PF04 617 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 BORAQ6PGQ7 559 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 IGFL3Q6UXB1 125 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 GDF7Q7Z4P5 450 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TSPYL5Q86VY4 417 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PLCZ1Q86YW0 608 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 FADS6Q8N9I5 356 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 KDF1Q8NAX2 398 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PSD4Q8NDX1 1056 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 MDS2Q8NDY4 140 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 CATSPER1Q8NEC5 780 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 OR2M3Q8NG83 312 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 OR5K1Q8NHB7 308 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ADAMTS16Q8TE57 1224 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 NRBF2Q96F24 287 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 SH3YL1Q96HL8 342 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TMEM41AQ96HV5 264 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ADAM19Q9H013 955 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 DSN1Q9H410 356 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 REEP1Q9H902 201 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 MED11Q9P086 117 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PPP4R1LQ9P1A2 415 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 STOML1Q9UBI4 398 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 SAMHD1Q9Y3Z3 626 aaKnown RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TESMINQ9Y4I5 508 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PCDHGA9Q9Y5G4 932 aaKnown RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 A0A0B4J2E0 115 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 A0A1B0GWA3 101 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 A0A1B0GX12 115 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 A0A1W2PRQ8 180 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ANKUB1A6NFN9 424 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CPSF4LA6NMK7 179 aaKnown RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 B4DXG7 233 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 G3V2T6 193 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 GNB5O14775 395 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CASQ2O14958 399 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PEX1O43933 1283 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SLC25A12O75746 678 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CBR3O75828 277 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 GADD45GO95257 159 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 LYPD3O95274 346 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 THY1P04216 161 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 FPR1P21462 350 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SLC1A3P43003 542 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 LIMS1P48059 325 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 MASP1P48740 699 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TNFSF10P50591 281 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CCR4P51679 360 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ARHGDIAP52565 204 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 IST1P53990 364 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CDH12P55289 794 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 DLX5P56178 289 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SESN3P58005 492 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SPIBQ01892 262 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 FOXO1Q12778 655 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PPP1R8Q12972 351 aaKnown RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 DGCR6Q14129 220 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 GANABQ14697 944 aaKnown RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TRAM2Q15035 370 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TRIP10Q15642 601 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ULK3Q6PHR2 472 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PLEKHM3Q6ZWE6 761 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TMEM179BQ7Z7N9 219 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 HIPK1Q86Z02 1210 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SULF2Q8IWU5 870 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 OFCC1Q8IZS5 231 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CADM2Q8N3J6 435 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TMCO5AQ8N6Q1 288 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 OR4K17Q8NGC6 315 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 OR4C15Q8NGM1 316 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 OR1J4Q8NGS1 313 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 OR52J3Q8NH60 311 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF563Q8TA94 476 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 DNAJA4Q8WW22 397 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 TMEM234Q8WY98 164 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ZCCHC14Q8WYQ9 949 aaKnown RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF524Q96C55 264 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SLC41A3Q96GZ6 507 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 GNRHR2Q96P88 292 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ALPK1Q96QP1 1244 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 EPYCQ99645 322 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 KLHDC3Q9BQ90 382 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms