RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 AHSA1O95433 338 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 CALRP27797 417 aaKnown RBP14.5□□□□□ -0.09
CPSF1-213ENST00000620219 GRPRP30550 384 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 SLC6A6P31641 620 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 ITGADQ13349 1161 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 LAIR1Q6GTX8 287 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 CXXC5Q7LFL8 322 aaKnown RBP14.5□□□□□ -0.09
CPSF1-213ENST00000620219 C1orf216Q8TAB5 229 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 TNFRSF13CQ96RJ3 184 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF350Q9GZX5 532 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 TEKT2Q9UIF3 430 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 ACACAQ13085 2346 aa14.5□□□□□ -0.09
CPSF1-213ENST00000620219 ICOSLGO75144 302 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 WBP4O75554 376 aaKnown RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SP9P0CG40 484 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 RELAQ04206 551 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 LGALS3BPQ08380 585 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 GPAT4Q86UL3 456 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF501Q96CX3 271 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 HOXD1Q9GZZ0 328 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 NUAK2Q9H093 628 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 LOXL2Q9Y4K0 774 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 RNF13O43567 381 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ZFAND5O76080 213 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 INPP1P49441 399 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF41P51814 821 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 CFHR1Q03591 330 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 NFATC3Q12968 1075 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 KLHL22Q53GT1 634 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 GPR155Q7Z3F1 870 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SNX33Q8WV41 574 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SECISBP2Q96T21 854 aaKnown RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 POLDIP3Q9BY77 421 aaKnown RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SIDT1Q9NXL6 827 aaKnown RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TMEM229AB2RXF0 380 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 BCAS1O75363 584 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TIAF1O95411 115 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 HTR1AP08908 422 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 RGS19P49795 217 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SOWAHCQ53LP3 525 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ACSM5Q6NUN0 579 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SPATC1Q76KD6 591 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ANKK1Q8NFD2 765 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TMEM80Q96HE8 168 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 GABARAPL1Q9H0R8 117 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ACOT13Q9NPJ3 140 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TESQ9UGI8 421 aaKnown RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 D6RAR5 112 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 GUCA1AP43080 201 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 CAPZA2P47755 286 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 MAN2A2P49641 1150 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SLC35A2P78381 396 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TSPAN31Q12999 210 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SDR9C7Q8NEX9 313 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 PSMA8Q8TAA3 256 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 NDNFQ8TB73 568 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SLC22A8Q8TCC7 542 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF764Q96H86 408 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-213ENST00000620219 TMEM9BQ9NQ34 198 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 SLC35A3Q9Y2D2 325 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 IER3IP1Q9Y5U9 82 aa14.49□□□□□ -0.09
CPSF1-213ENST00000620219 CDHR4A6H8M9 788 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 NKX2-2O95096 273 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 F13BP05160 661 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PSMA1P25786 263 aaKnown RBP14.48□□□□□ -0.09
CPSF1-213ENST00000620219 TACR3P29371 465 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SFTPDP35247 375 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SOX6P35712 828 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 STAT5AP42229 794 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PPICP45877 212 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 RPS5P46782 204 aaKnown RBP14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SPCS2Q15005 226 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 DGUOKQ16854 277 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 AMER2Q8N7J2 671 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 TOR1AIP2Q8NFQ8 470 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 OR13F1Q8NGS4 319 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 FAR1Q8WVX9 515 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 ASB15Q8WXK1 588 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SH3GL3Q99963 347 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 MYO15AQ9UKN7 3530 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 ITGA3P26006 1051 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 GABARAPL2P60520 117 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 ERVK-25P63136 954 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 TIMM50Q3ZCQ8 353 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PRAMEF8Q5VWM4 474 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PRAMEF7Q5VXH5 474 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PROKR2Q8NFJ6 384 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 RHOXF1Q8NHV9 184 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 GIMAP5Q96F15 307 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SLC41A2Q96JW4 573 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 PTHP01270 115 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 LIPKQ5VXJ0 399 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 DHRS4L2Q6PKH6 230 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 UBQLNLQ8IYU4 475 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 OR7G1Q8NGA0 311 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 RBM38Q9H0Z9 239 aaKnown RBP14.48□□□□□ -0.09
CPSF1-213ENST00000620219 ZNF768Q9H5H4 540 aaKnown RBP14.48□□□□□ -0.09
CPSF1-213ENST00000620219 HSPE1-MOB4S4R3N1 261 aa14.48□□□□□ -0.09
CPSF1-213ENST00000620219 SEMA7AO75326 666 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms