RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 WDR60Q8WVS4 1066 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SLC38A2Q96QD8 506 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 LINC00470Q9BZP3 86 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TRIM5Q9C035 493 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ESM1Q9NQ30 184 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SLC35C2Q9NQQ7 365 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 NKIRAS2Q9NYR9 191 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 FLRT3Q9NZU0 649 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 UTS2RQ9UKP6 389 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 VSTM5A8MXK1 200 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 H3BQF6 201 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 M0QZ24 198 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ERAL1O75616 437 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 KLK1P06870 262 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 PRKCAP17252 672 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 IVDP26440 423 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MPGP29372 298 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CDC25BP30305 580 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 PRPS1P60891 318 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 HEPACAMQ14CZ8 416 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 VPS26BQ4G0F5 336 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 LGSNQ5TDP6 509 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 RAPH1Q70E73 1250 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SLC46A3Q7Z3Q1 461 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 IGDCC3Q8IVU1 814 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 LILRA2Q8N149 483 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TEX9Q8N6V9 391 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CDRT4Q8N9R6 151 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ZNF527Q8NB42 609 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ZNF483Q8TF39 744 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 DUSP19Q8WTR2 217 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 EFHD2Q96C19 240 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 ANKRD27Q96NW4 1050 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 A4GALTQ9NPC4 353 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 UBQLN4Q9NRR5 601 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CLEC4AQ9UMR7 237 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SNX6Q9UNH7 406 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 OR10H1Q9Y4A9 318 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SPIN1Q9Y657 262 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 IGHV1-18A0A0C4DH31 117 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 NPIPB9F8W1W9 429 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 M0R1B8 84 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ANKRD28O15084 1053 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TRAF3IP2O43734 574 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 DEAF1O75398 565 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 LYZL6O75951 148 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CLPXO76031 633 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 BCL10O95999 233 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 GSNP06396 782 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 DDCP20711 480 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 PRPH2P23942 346 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 FPR2P25090 351 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 KCNJ1P48048 391 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TMEM33P57088 247 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 NAA20P61599 178 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 LMO4P61968 165 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 RAE1P78406 368 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 TGFBR3Q03167 851 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 FOXF1Q12946 379 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 NNATQ16517 81 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TSNAXIP1Q2TAA8 658 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 KLHL26Q53HC5 615 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TRMT10BQ6PF06 316 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 CCDC137Q6PK04 289 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 ATG4DQ86TL0 474 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 PDIK1LQ8N165 341 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 OR9A2Q8NGT5 310 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CEP70Q8NHQ1 597 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CLDND2Q8NHS1 167 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 NANPQ8TBE9 248 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 WFDC12Q8WWY7 111 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 RDH5Q92781 318 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 APH1AQ96BI3 265 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 FCRL1Q96LA6 429 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MTERF1Q99551 399 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 SF3B5Q9BWJ5 86 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNCA-213ENST00000618500 PARPBPQ9NWS1 579 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ASB6Q9NWX5 421 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 POU2F3Q9UKI9 436 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ICAM5Q9UMF0 924 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 TRAPPC4Q9Y296 219 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 HDGFL3Q9Y3E1 203 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 PSAT1Q9Y617 370 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 A0A0G2JMP0 313 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 A0A0X1KG70 313 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 RPL36A-HNRNPH2H7BZ11 118 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 FAAHO00519 579 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 EFNA2O43921 213 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 RP2O75695 350 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 IGKV1D-16P01601 117 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 IGKV3-15P01624 115 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 RPS17P08708 135 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 SAGP10523 405 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 FEN1P39748 380 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 ELK3P41970 407 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 MAGEA12P43365 314 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PRIM2P49643 509 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ZNF83P51522 516 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms