RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 OR52L1Q8NGH7 329 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 OR51L1Q8NGJ5 315 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 TP53INP1Q96A56 240 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 TMED9Q9BVK6 235 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 TEX12Q9BXU0 123 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 BARHL1Q9BZE3 327 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 OR8D2Q9GZM6 311 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 C14orf119Q9NWQ9 140 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 SATB2Q9UPW6 733 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 MED31Q9Y3C7 131 aa11.46□□□□□ -0.58
CIITA-212ENST00000618207 TMEM150CB9EJG8 249 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 HRO43593 1189 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 SRPX2O60687 465 aaPredicted RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 CTNSO60931 367 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CELP19835 753 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CRYZQ08257 329 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 GRAMD2AQ8IUY3 354 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CDK20Q8IZL9 346 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 NLGN4YQ8NFZ3 816 aaPredicted RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 TSLPQ969D9 159 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 HDHD5Q9BXW7 423 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PRRG3Q9BZD7 231 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 NRSN2Q9GZP1 204 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 OR10A5Q9H207 317 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 RNF215Q9Y6U7 377 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CACNA1EQ15878 2313 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 SNTNA6NMZ2 147 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 KLF4O43474 513 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 OR2B3O76000 313 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 NGFRP08138 427 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 RPS4Y1P22090 263 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 MAP3K8P41279 467 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PPP5CP53041 499 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 HNRNPKP61978 463 aaKnown RBP eCLIP11.45□□□□□ -0.58
CIITA-212ENST00000618207 DMWDQ09019 674 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 RAB40BQ12829 278 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 SMAD2Q15796 467 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 BMP8AQ7Z5Y6 402 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 SIRT6Q8N6T7 355 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 HS6ST2Q96MM7 605 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 TNFRSF13CQ96RJ3 184 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 GAL3ST4Q96RP7 486 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 ANKRD19PQ9H560 264 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 TXNL4BQ9NX01 149 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 CBLCQ9ULV8 474 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 STUB1Q9UNE7 303 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PLCL2Q9UPR0 1127 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 CFL2Q9Y281 166 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PCNX3Q9H6A9 2034 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 C17orf105B2RV13 164 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PPP1R3DO95685 299 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 SLC1A3P43003 542 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 MLLT11Q13015 90 aaPredicted RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 C6orf183Q5T699 404 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 AADACL4Q5VUY2 407 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 OAFQ86UD1 273 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 LRRC17Q8N6Y2 441 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 POC5Q8NA72 575 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 VSTM2LQ96N03 204 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 DCLRE1CQ96SD1 692 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 ISG20L2Q9H9L3 353 aaKnown RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 Q9N2J8 555 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 KRCC1Q9NPI7 259 aaPredicted RBP11.45□□□□□ -0.58
CIITA-212ENST00000618207 CLDN16Q9Y5I7 305 aa11.45□□□□□ -0.58
CIITA-212ENST00000618207 A0A1B0GVT2 93 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 C17orf51A8MQB3 221 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 CSTAP01040 98 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 SDC2P34741 201 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 CT45A2Q5DJT8 189 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 VWA2Q5GFL6 755 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 STEAP3Q658P3 488 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 KLBQ86Z14 1044 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 SPRYD4Q8WW59 207 aaPredicted RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 NR4A3Q92570 626 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 HLA-CQ95604 372 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 ZNF304Q9HCX3 659 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 FSCN3Q9NQT6 498 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 NDUFB11Q9NX14 153 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 TNFRSF10DQ9UBN6 386 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 SEC14L4Q9UDX3 406 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 ZNF223Q9UK11 482 aaPredicted RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 KDM4EB2RXH2 506 aaPredicted RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 SOX1O00570 391 aaPredicted RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 DVL2O14641 736 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 LIMK1P53667 647 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 HNRNPA0Q13151 305 aaKnown RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 ZMAT1Q5H9K5 638 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 ZCCHC12Q6PEW1 402 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 POMZP3Q6PJE2 187 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms