RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 FIG4Q92562 907 aa22.38■■□□□ 1.17
PMS1-220ENST00000618056 AURKBQ96GD4 344 aaPredicted RBP22.38■■□□□ 1.17
PMS1-220ENST00000618056 ZNF845Q96IR2 970 aaPredicted RBP22.38■■□□□ 1.17
PMS1-220ENST00000618056 THUMPD1Q9NXG2 353 aaKnown RBP22.38■■□□□ 1.17
PMS1-220ENST00000618056 FOXD3Q9UJU5 478 aaPredicted RBP22.38■■□□□ 1.17
PMS1-220ENST00000618056 TRIM33Q9UPN9 1127 aa22.38■■□□□ 1.17
PMS1-220ENST00000618056 AGAP5A6NIR3 686 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 NR5A2O00482 541 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 EIF1AYO14602 144 aaKnown RBP22.37■■□□□ 1.17
PMS1-220ENST00000618056 NR2F1P10589 423 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 AGFG1P52594 562 aaKnown RBP22.37■■□□□ 1.17
PMS1-220ENST00000618056 KCNJ10P78508 379 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 PON3Q15166 354 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 MAPK11Q15759 364 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 LRIF1Q5T3J3 769 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 GCNT2Q8N0V5 402 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 FBXO27Q8NI29 283 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 FNDC9Q8TBE3 224 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 RNASE6Q93091 150 aaKnown RBP22.37■■□□□ 1.17
PMS1-220ENST00000618056 ZNF524Q96C55 264 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 C14orf79Q96F83 325 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 ZNF385DQ9H6B1 395 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 MTHFD2LQ9H903 347 aaPredicted RBP22.37■■□□□ 1.17
PMS1-220ENST00000618056 RNF122Q9H9V4 155 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.37■■□□□ 1.17
PMS1-220ENST00000618056 P2RX2Q9UBL9 471 aa22.37■■□□□ 1.17
PMS1-220ENST00000618056 CSMD1Q96PZ7 3565 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 EFNA2O43921 213 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 UBTFL6P0CB48 400 aaPredicted RBP22.36■■□□□ 1.17
PMS1-220ENST00000618056 FCGR2AP12318 317 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 ETFAP13804 333 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 CAPN3P20807 821 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 IL11P20809 199 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 RPS4Y1P22090 263 aaKnown RBP22.36■■□□□ 1.17
PMS1-220ENST00000618056 PEX19P40855 299 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 CRATP43155 626 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 CCR4P51679 360 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 QPRTQ15274 297 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 AGKQ53H12 422 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 CMIPQ8IY22 773 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 LILRA2Q8N149 483 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 OR10D3Q8NH80 312 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 ST8SIA1Q92185 356 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 THUMPD3Q9BV44 507 aaKnown RBP22.36■■□□□ 1.17
PMS1-220ENST00000618056 QRSL1Q9H0R6 528 aaKnown RBP22.36■■□□□ 1.17
PMS1-220ENST00000618056 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
PMS1-220ENST00000618056 EXOSC3Q9NQT5 275 aaKnown RBP22.36■■□□□ 1.17
PMS1-220ENST00000618056 POLQO75417 2590 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 A0A1W2PNV4 684 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 TNFSF13O75888 250 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 SSTR2P30874 369 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 EIF1AXP47813 144 aaKnown RBP22.35■■□□□ 1.17
PMS1-220ENST00000618056 DSTNP60981 165 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 SGCBQ16585 318 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 OR2V1Q8NHB1 315 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 PIGMQ9H3S5 423 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 TMEM185BQ9H7F4 350 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 SLC25A37Q9NYZ2 338 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 CALML5Q9NZT1 146 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.35■■□□□ 1.17
PMS1-220ENST00000618056 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 SPG11Q96JI7 2443 aa22.35■■□□□ 1.17
PMS1-220ENST00000618056 A0A0G2JND7 137 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 A0A0J9YW62 118 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 EEF1E1-BLOC1S5C9J1V9 151 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 CLIC1O00299 241 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 EEF1E1O43324 174 aaKnown RBP22.34■■□□□ 1.17
PMS1-220ENST00000618056 CYP7B1O75881 506 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 TFPTP0C1Z6 253 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 NCF2P19878 526 aaPredicted RBP22.34■■□□□ 1.17
PMS1-220ENST00000618056 PGCP20142 388 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 FADDQ13158 208 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 RGNQ15493 299 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 PDSS1Q5T2R2 415 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 METTL21CQ5VZV1 264 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 KLHL15Q96M94 604 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 KCNN3Q9UGI6 736 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 GMEB1Q9Y692 573 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 CSMD2Q7Z408 3487 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 A0A1W2PP18 115 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 GJE1A6NN92 205 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 BCAS1O75363 584 aaPredicted RBP22.34■■□□□ 1.17
PMS1-220ENST00000618056 OPN1LWP04000 364 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 BMP2P12643 396 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 UQCRC1P31930 480 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 CRISP3P54108 245 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 PLAURQ03405 335 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 SELENBP1Q13228 472 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 PAGE3Q5JUK9 113 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 HMGN2P46Q86SG4 172 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 SLC38A5Q8WUX1 472 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 TMEM234Q8WY98 164 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 PACSIN3Q9UKS6 424 aa22.34■■□□□ 1.17
PMS1-220ENST00000618056 ABCA4P78363 2273 aa22.33■■□□□ 1.16
PMS1-220ENST00000618056 TRBV5-3A0A0A0MS03 114 aa22.33■■□□□ 1.16
PMS1-220ENST00000618056 TNFSF11O14788 317 aa22.33■■□□□ 1.16
PMS1-220ENST00000618056 SHOX2O60902 331 aaPredicted RBP22.33■■□□□ 1.16
PMS1-220ENST00000618056 DBIP07108 87 aaKnown RBP22.33■■□□□ 1.16
PMS1-220ENST00000618056 GNA13Q14344 377 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms