RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SYPP08247 313 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 GABARAPL2P60520 117 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 TSPAN31Q12999 210 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 EBPQ15125 230 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 TOMM34Q15785 309 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 SLX4IPQ5VYV7 408 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 CEP76Q8TAP6 659 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 GNPDA2Q8TDQ7 276 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SMAP2Q8WU79 429 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 MUL1Q969V5 352 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 LCORQ96JN0 433 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 ARPC5LQ9BPX5 153 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 G6PC3Q9BUM1 346 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 TMEM27Q9HBJ8 222 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 VCX3AQ9NNX9 186 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 MKKSQ9NPJ1 570 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 PRODH2Q9UF12 536 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ZNF223Q9UK11 482 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 MMACHCQ9Y4U1 282 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 LRRTM2O43300 516 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 DYRK3O43781 588 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 AK1P00568 194 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CELA2AP08217 269 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 TCEA1P23193 301 aaKnown RBP7.15□□□□□ -1.26
NEK3-207ENST00000617054 PPICP45877 212 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 SLC9A3P48764 834 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 EMP3P54852 163 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CXCR4P61073 352 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 VBP1P61758 197 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CDK5Q00535 292 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CRYZQ08257 329 aaKnown RBP7.15□□□□□ -1.26
NEK3-207ENST00000617054 FGFBP1Q14512 234 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 HLA-DQA1Q5Y7H0 255 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 BICRALQ6AI39 1079 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CARFQ8N187 725 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 POGLUT1Q8NBL1 392 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 TEX47Q8TBZ9 253 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 DAZLQ92904 295 aaKnown RBP7.15□□□□□ -1.26
NEK3-207ENST00000617054 BPIFA2Q96DR5 249 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 WWTR1Q9GZV5 400 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 RERGLQ9H628 205 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 RNF167Q9H6Y7 350 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 CLN6Q9NWW5 311 aa7.15□□□□□ -1.26
NEK3-207ENST00000617054 SIDT1Q9NXL6 827 aaKnown RBP7.15□□□□□ -1.26
NEK3-207ENST00000617054 URB1O60287 2271 aaKnown RBP7.15□□□□□ -1.26
NEK3-207ENST00000617054 PCNX2A6NKB5 2137 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 BLACEA4D250 179 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 NPIPB9F8W1W9 429 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 GTPBP1O00178 669 aaKnown RBP7.15□□□□□ -1.27
NEK3-207ENST00000617054 SCO2O43819 266 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 LDOC1O95751 146 aaPredicted RBP7.15□□□□□ -1.27
NEK3-207ENST00000617054 ABCD3P28288 659 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 LIPAP38571 399 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 PCYT1AP49585 367 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 AQP6Q13520 282 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 MED22Q15528 200 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 KLHL26Q53HC5 615 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 C12orf73Q69YU5 71 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 SLC27A4Q6P1M0 643 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 OR1N1Q8NGS0 311 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 TNFRSF13CQ96RJ3 184 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 ULBP3Q9BZM4 244 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 COPS7AQ9UBW8 275 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 SPTBN2O15020 2390 aa7.15□□□□□ -1.27
NEK3-207ENST00000617054 A0A0B4J2E0 115 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 A0A1B0GX12 115 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 HAX1O00165 279 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SCDO00767 359 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 IMPA2O14732 288 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 TOX3O15405 576 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 SERPINI2O75830 405 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 NUDT14O95848 222 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CDK1P06493 297 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 MSL3P1P0C860 447 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ITPKBP27987 946 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RPS6KA3P51812 740 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 EMP2P54851 167 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 COX10Q12887 443 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SPCS2Q15005 226 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF141Q15928 474 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SYT14P1Q58G82 188 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 BORAQ6PGQ7 559 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 PRSS48Q7RTY5 328 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ANKRD37Q7Z713 158 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 MARCH9Q86YJ5 346 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CYB561A3Q8NBI2 242 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 APCDD1LQ8NCL9 501 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 FKBP10Q96AY3 582 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CRB3Q9BUF7 120 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OR52D1Q9H346 318 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 HHATLQ9HCP6 504 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 FBXL4Q9UKA2 621 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SRPK3Q9UPE1 567 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 B3GALT1Q9Y5Z6 326 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CUL9Q8IWT3 2517 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms