RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDCP1Q9H5V8 836 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 LOC105369274A0A096LPK9 316 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 LOC102723532A0A0G2JNH3 316 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 OR6C76A6NM76 312 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 IGHG1P01857 330 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 ARHGDIBP52566 201 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 CEACAM19Q7Z692 300 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SPRED2Q7Z698 418 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 KLBQ86Z14 1044 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 OR4N4Q8N0Y3 316 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 ARL5BQ96KC2 179 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TMEM38AQ9H6F2 299 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 DUSP22Q9NRW4 184 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 GPR52Q9Y2T5 361 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 R4GN57 208 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 URB1O60287 2271 aaKnown RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 H3BUI4 141 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SUSD5O60279 629 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 CSO75390 466 aaKnown RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 HLCSP50747 726 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SLC35A1P78382 337 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 KEAP1Q14145 624 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 LIPKQ5VXJ0 399 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TUBA3EQ6PEY2 450 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 PELI3Q8N2H9 469 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 OR13C3Q8NGS6 347 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 NEIL3Q8TAT5 605 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SGCDQ92629 289 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TAAR9Q96RI9 348 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MGLLQ99685 303 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 URM1Q9BTM9 101 aaKnown RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 OR52D1Q9H346 318 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 C19orf53Q9UNZ5 99 aaPredicted RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 WASF3Q9UPY6 502 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 A0A1W2PR48 441 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 SLC2A2P11168 524 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 CD79AP11912 226 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 TACR3P29371 465 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 TRIM23P36406 574 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ARPC4P59998 168 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ERVK-25P63136 954 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 OCLNQ16625 522 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 SLC35F2Q8IXU6 374 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 MORN4Q8NDC4 146 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 TMPRSS11EQ9UL52 423 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 FARSAQ9Y285 508 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 PCDHGA8Q9Y5G5 932 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 TRIP12Q14669 1992 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 SLC1A7O00341 560 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 HSPA12AO43301 675 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ORC5O43913 435 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 NOS1APO75052 506 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 MYF6P23409 242 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 RPS5P46782 204 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 EIF2B1Q14232 305 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 CA13Q8N1Q1 262 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 GPBAR1Q8TDU6 330 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 CCDC107Q8WV48 283 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 AGPAT4Q9NRZ5 378 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 WIF1Q9Y5W5 379 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 FAM172BPA6NC97 362 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 LCMT2O60294 686 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 SLC43A1O75387 559 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 MRPL33O75394 65 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 STT3AP46977 705 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 PCBD1P61457 104 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ZNF750Q32MQ0 723 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 PROX2Q3B8N5 592 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 KIAA0907Q7Z7F0 614 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 CYB561A3Q8NBI2 242 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 SLC2A12Q8TD20 617 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 MED28Q9H204 178 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 TCEAL2Q9H3H9 227 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 RBMX2Q9Y388 322 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 LOC102725191A0A1B0GVB3 256 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 C4orf47A7E2U8 309 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 EIF4E2O60573 245 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 FRKP42685 505 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 POU3F1Q03052 451 aaPredicted RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 MAVSQ7Z434 540 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 CPEB2Q7Z5Q1 589 aaKnown RBP8.78□□□□□ -1
CLTCL1-208ENST00000615606 TOMM5Q8N4H5 51 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 SYT14Q8NB59 555 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 OR8S1Q8NH09 359 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ACOT12Q8WYK0 555 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 NINJ1Q92982 152 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ZNF583Q96ND8 569 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 INTS14Q96SY0 518 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 ULBP2Q9BZM5 246 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 EMC9Q9Y3B6 208 aa8.78□□□□□ -1
CLTCL1-208ENST00000615606 DOCK5Q9H7D0 1870 aa8.77□□□□□ -1
CLTCL1-208ENST00000615606 DENRO43583 198 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 RGS9O75916 674 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 OPN1LWP04000 364 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 LCATP04180 440 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 GPX2P18283 190 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms