RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PNPOQ9NVS9 261 aa20.31■□□□□ 0.84
FAM228B-208ENST00000613899 BEX4Q9NWD9 120 aaPredicted RBP20.31■□□□□ 0.84
FAM228B-208ENST00000613899 MAP1AP78559 2803 aaPredicted RBP20.31■□□□□ 0.84
FAM228B-208ENST00000613899 ETV2O00321 342 aaPredicted RBP20.3■□□□□ 0.84
FAM228B-208ENST00000613899 EFNA2O43921 213 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 KIAA0513O60268 411 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 FCMRO60667 390 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 CPSF4O95639 269 aaKnown RBP20.3■□□□□ 0.84
FAM228B-208ENST00000613899 CSTAP01040 98 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 GUSBP08236 651 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 NID1P14543 1247 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 SLC7A1P30825 629 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 KHKP50053 298 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 SKP2Q13309 424 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 CASP8Q14790 479 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 QPRTQ15274 297 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 TMEM176BQ3YBM2 270 aaPredicted RBP20.3■□□□□ 0.84
FAM228B-208ENST00000613899 FAM174BQ3ZCQ3 159 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 SAXO2Q658L1 398 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 C3orf33Q6P1S2 294 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 ROBO4Q8WZ75 1007 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 ZBTB9Q96C00 473 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 ZC3HAV1LQ96H79 300 aaKnown RBP20.3■□□□□ 0.84
FAM228B-208ENST00000613899 SRXN1Q9BYN0 137 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 LAT2Q9GZY6 243 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 COQ10BQ9H8M1 238 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 GP6Q9HCN6 339 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 MKLN1Q9UL63 735 aa20.3■□□□□ 0.84
FAM228B-208ENST00000613899 TMEM120BA0PK00 339 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 UGT2B17O75795 530 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 OR12D1P0DN82 309 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 S100A3P33764 101 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 CHI3L1P36222 383 aaPredicted RBP20.29■□□□□ 0.84
FAM228B-208ENST00000613899 PHC1P78364 1004 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 TMEM201Q5SNT2 666 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 TNFAIP8L2Q6P589 184 aaPredicted RBP20.29■□□□□ 0.84
FAM228B-208ENST00000613899 STAC2Q6ZMT1 411 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 EIF3MQ7L2H7 374 aaKnown RBP20.29■□□□□ 0.84
FAM228B-208ENST00000613899 ABHD3Q8WU67 409 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 XAGE5Q8WWM1 108 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 ST8SIA1Q92185 356 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 NEURL3Q96EH8 262 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 SLC35A5Q9BS91 424 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 C12orf49Q9H741 205 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 AIG1Q9NVV5 245 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 THAP1Q9NVV9 213 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 KLHL13Q9P2N7 655 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 KCNE5Q9UJ90 142 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 WDR45Q9Y484 360 aa20.29■□□□□ 0.84
FAM228B-208ENST00000613899 TRPC5OSA6NMA1 111 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 SDHDO14521 159 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 CYP7B1O75881 506 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 ALDOCP09972 364 aaKnown RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 PGCP20142 388 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 CASP9P55211 416 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 ADAM8P78325 824 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 HPCAP84074 193 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 FOXD4Q12950 439 aaPredicted RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 ANKRD34AQ69YU3 496 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 FCRLAQ7L513 359 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 SPATA19Q7Z5L4 167 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 SLC43A2Q8N370 569 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 TRIML2Q8N7C3 387 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 ATP6V1C2Q8NEY4 427 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 TMEM234Q8WY98 164 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 MARK4Q96L34 752 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 CCDC115Q96NT0 180 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 THUMPD3Q9BV44 507 aaKnown RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 OR10A4Q9H209 315 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 MARCOQ9UEW3 520 aaPredicted RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 BTNL2Q9UIR0 455 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 SLC35A3Q9Y2D2 325 aa20.28■□□□□ 0.84
FAM228B-208ENST00000613899 ZNF469Q96JG9 3925 aaPredicted RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 SETD2Q9BYW2 2564 aaPredicted RBP20.28■□□□□ 0.84
FAM228B-208ENST00000613899 CENPVL1A0A0U1RR11 272 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 HDAC3O15379 428 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 DNAJA2O60884 412 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 UBTFL6P0CB48 400 aaPredicted RBP20.27■□□□□ 0.84
FAM228B-208ENST00000613899 WDR4P57081 412 aaKnown RBP20.27■□□□□ 0.84
FAM228B-208ENST00000613899 LRRC74AQ0VAA2 488 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 ATG16L1Q676U5 607 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 TYW3Q6IPR3 259 aaKnown RBP20.27■□□□□ 0.84
FAM228B-208ENST00000613899 RAB3IL1Q8TBN0 382 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 RAB8BQ92930 207 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 ROPN1LQ96C74 230 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 TACO1Q9BSH4 297 aaKnown RBP20.27■□□□□ 0.84
FAM228B-208ENST00000613899 GPR52Q9Y2T5 361 aa20.27■□□□□ 0.84
FAM228B-208ENST00000613899 FLNAP21333 2647 aaKnown RBP20.26■□□□□ 0.83
FAM228B-208ENST00000613899 SNNO75324 88 aaPredicted RBP20.26■□□□□ 0.83
FAM228B-208ENST00000613899 ERLIN1O75477 346 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 PRKD3O94806 890 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 PSMB1P20618 241 aaKnown RBP20.26■□□□□ 0.83
FAM228B-208ENST00000613899 FPR1P21462 350 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 ANXA11P50995 505 aaKnown RBP20.26■□□□□ 0.83
FAM228B-208ENST00000613899 SLC18A1P54219 525 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 RAC3P60763 192 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 UFM1P61960 85 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 TXNL4AP83876 142 aaKnown RBP20.26■□□□□ 0.83
FAM228B-208ENST00000613899 TIGD2Q4W5G0 525 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 BEX5Q5H9J7 111 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms