RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MAN1A2O60476 641 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 EIF4E2O60573 245 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 TPST2O60704 377 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 BCAS1O75363 584 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OR6B1O95007 311 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 DIRAS1O95057 198 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OR5F1O95221 314 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 THRBP10828 461 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 FPR1P21462 350 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 RRM2P31350 389 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 DNAJA1P31689 397 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 LIMS1P48059 325 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 CLK3P49761 638 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 HMGA2P52926 109 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SMIM11AP58511 58 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SPIBQ01892 262 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 EPS8Q12929 822 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SNTA1Q13424 505 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ACER2Q5QJU3 275 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 FCRLBQ6BAA4 426 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 DESI1Q6ICB0 168 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SHQ1Q6PI26 577 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 HIPK1Q86Z02 1210 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 PACRGLQ8N7B6 248 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 Q8NA96 180 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ICA1LQ8NDH6 482 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OR4C15Q8NGM1 316 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OR5K1Q8NHB7 308 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 PRR7Q8TB68 274 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 GRHL3Q8TE85 626 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 EME1Q96AY2 570 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 NODALQ96S42 347 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 MCHR1Q99705 422 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF559Q9BR84 538 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OSBPL10Q9BXB5 764 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 LAT2Q9GZY6 243 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 GABARAPL1Q9H0R8 117 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ANKRD19PQ9H560 264 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SH2D2AQ9NP31 389 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 VNN3Q9NY84 501 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 TEKT2Q9UIF3 430 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 CNOT11Q9UKZ1 510 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 OAZ3Q9UMX2 235 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 POLHQ9Y253 713 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 SAMHD1Q9Y3Z3 626 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 LYVE1Q9Y5Y7 322 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 CHCHD2Q9Y6H1 151 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 EML6Q6ZMW3 1958 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 ADGRG4Q8IZF6 3080 aa10.44□□□□□ -0.74
SLIRP-212ENST00000613856 PRRC2CQ9Y520 2896 aaKnown RBP10.44□□□□□ -0.74
SLIRP-212ENST00000613856 IGLV3-32A0A0A0MS00 114 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 A0A1W2PRQ8 180 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ARRDC5A6NEK1 342 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 NDUFB5O43674 189 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 E2F6O75461 281 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ANGPTL1O95841 491 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 H1F0P07305 194 aaKnown RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 UBTFL6P0CB48 400 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF23P17027 643 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ITGA3P26006 1051 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 HTR2AP28223 471 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 IFNA8P32881 189 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ACAA2P42765 397 aaKnown RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 SLC6A8P48029 635 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 HLCSP50747 726 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 GAS1P54826 345 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 SUMO3P55854 103 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 DGCR6Q14129 220 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ENTPD8Q5MY95 495 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 LPCAT4Q643R3 524 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF613Q6PF04 617 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 RTL4Q6ZR62 310 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 PLEKHM3Q6ZWE6 761 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 TSPYL5Q86VY4 417 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ZDHHC13Q8IUH4 622 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 GALNT16Q8N428 558 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 TMEM156Q8N614 296 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 SIRT6Q8N6T7 355 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 LSMEM1Q8N8F7 131 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 OR10G3Q8NGC4 313 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 PHOSPHO1Q8TCT1 267 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 PAQR8Q8TEZ7 354 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 NTNG2Q96CW9 530 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 SGCZQ96LD1 299 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 PSD2Q9BQI7 771 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 FUZQ9BT04 418 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 RTN4RQ9BZR6 473 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 TRIM2Q9C040 744 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 KLHL4Q9C0H6 718 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 NMNAT1Q9HAN9 279 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-212ENST00000613856 MAN2C1Q9NTJ4 1040 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ACER3Q9NUN7 267 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 HPF1Q9NWY4 346 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 ABI3Q9P2A4 366 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 TESMINQ9Y4I5 508 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 CELSR1Q9NYQ6 3014 aa10.43□□□□□ -0.74
SLIRP-212ENST00000613856 TRAPPC13A5PLN9 417 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ANKRD33BA6NCL7 494 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 SAC3D1A6NKF1 404 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms