RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SH3BGRL2Q9UJC5 107 aa12.01□□□□□ -0.49
MDC1-209ENST00000613547 H0Y3Z8 333 aa12□□□□□ -0.49
MDC1-209ENST00000613547 H3BML4 177 aa12□□□□□ -0.49
MDC1-209ENST00000613547 M0QX08 132 aa12□□□□□ -0.49
MDC1-209ENST00000613547 NME4O00746 187 aa12□□□□□ -0.49
MDC1-209ENST00000613547 ZNHIT1O43257 154 aa12□□□□□ -0.49
MDC1-209ENST00000613547 WDR1O75083 606 aa12□□□□□ -0.49
MDC1-209ENST00000613547 GMNNO75496 209 aa12□□□□□ -0.49
MDC1-209ENST00000613547 GP1BBP13224 206 aa12□□□□□ -0.49
MDC1-209ENST00000613547 CPN1P15169 458 aa12□□□□□ -0.49
MDC1-209ENST00000613547 PRKCAP17252 672 aa12□□□□□ -0.49
MDC1-209ENST00000613547 ELK4P28324 431 aa12□□□□□ -0.49
MDC1-209ENST00000613547 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
MDC1-209ENST00000613547 KCNC4Q03721 635 aa12□□□□□ -0.49
MDC1-209ENST00000613547 BCL2A1Q16548 175 aa12□□□□□ -0.49
MDC1-209ENST00000613547 C3AR1Q16581 482 aa12□□□□□ -0.49
MDC1-209ENST00000613547 TMEM44Q2T9K0 475 aa12□□□□□ -0.49
MDC1-209ENST00000613547 C1QL3Q5VWW1 255 aa12□□□□□ -0.49
MDC1-209ENST00000613547 ZNF585AQ6P3V2 769 aa12□□□□□ -0.49
MDC1-209ENST00000613547 CCDC80Q76M96 950 aa12□□□□□ -0.49
MDC1-209ENST00000613547 DOLPP1Q86YN1 238 aa12□□□□□ -0.49
MDC1-209ENST00000613547 PINK1Q9BXM7 581 aa12□□□□□ -0.49
MDC1-209ENST00000613547 PRDM14Q9GZV8 571 aa12□□□□□ -0.49
MDC1-209ENST00000613547 SERINC1Q9NRX5 453 aa12□□□□□ -0.49
MDC1-209ENST00000613547 PNPLA3Q9NST1 481 aa12□□□□□ -0.49
MDC1-209ENST00000613547 RLIMQ9NVW2 624 aa12□□□□□ -0.49
MDC1-209ENST00000613547 ALKBH4Q9NXW9 302 aa12□□□□□ -0.49
MDC1-209ENST00000613547 ABCD2Q9UBJ2 740 aa12□□□□□ -0.49
MDC1-209ENST00000613547 TINAGQ9UJW2 476 aa12□□□□□ -0.49
MDC1-209ENST00000613547 CAMK2AQ9UQM7 478 aa12□□□□□ -0.49
MDC1-209ENST00000613547 AP4B1Q9Y6B7 739 aa12□□□□□ -0.49
MDC1-209ENST00000613547 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 GJE1A6NN92 205 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 AHRRA9YTQ3 701 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 B2RBV5 119 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 E9PLN8 166 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 FAAHO00519 579 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 CCL21O00585 134 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 LRRTM2O43300 516 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 BCAS1O75363 584 aaPredicted RBP11.99□□□□□ -0.49
MDC1-209ENST00000613547 MFN2O95140 757 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 OPN1SWP03999 348 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 C8BP07358 591 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 ZNF708P17019 499 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 ACVR2AP27037 513 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 HTR3AP46098 478 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 IDH2P48735 452 aaKnown RBP11.99□□□□□ -0.49
MDC1-209ENST00000613547 GSK3BP49841 420 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SESN3P58005 492 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 NCALDP61601 193 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SLC25A3Q00325 362 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 MERTKQ12866 999 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 EPS8Q12929 822 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 FOXF1Q12946 379 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 TOMM34Q15785 309 aaPredicted RBP11.99□□□□□ -0.49
MDC1-209ENST00000613547 SPATS1Q496A3 300 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 C4orf17Q53FE4 359 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SLC25A53Q5H9E4 307 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SAMD4BQ5PRF9 694 aaKnown RBP11.99□□□□□ -0.49
MDC1-209ENST00000613547 CHMP1BQ7LBR1 199 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 ULK2Q8IYT8 1036 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 UBQLNLQ8IYU4 475 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 CLIP4Q8N3C7 705 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 OR5M1Q8NGP8 315 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 FBXO27Q8NI29 283 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SMPDL3BQ92485 455 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 RELTQ969Z4 430 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 VKORC1Q9BQB6 163 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 ACER3Q9NUN7 267 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 TMEM181Q9P2C4 612 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 BAG5Q9UL15 447 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SLC5A6Q9Y289 635 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 ZNF337Q9Y3M9 751 aa11.99□□□□□ -0.49
MDC1-209ENST00000613547 SPIN1Q9Y657 262 aaPredicted RBP11.99□□□□□ -0.49
MDC1-209ENST00000613547 HELZ2Q9BYK8 2649 aaKnown RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 SHISA8B8ZZ34 492 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 ETV2O00321 342 aaPredicted RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 SYT5O00445 386 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 AP3D1O14617 1153 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 AGFG2O95081 481 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 KDELR2P33947 212 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 APOBEC1P41238 236 aaKnown RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 STARP49675 285 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 LHX2P50458 406 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 RGS8P57771 180 aaPredicted RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 RPS3AP61247 264 aaKnown RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 RAC1P63000 192 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 PLAURQ03405 335 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 SRYQ05066 204 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 LRRC23Q53EV4 343 aaPredicted RBP11.98□□□□□ -0.49
MDC1-209ENST00000613547 EMC4Q5J8M3 183 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 DCST1Q5T197 706 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 C1orf185Q5T7R7 199 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 TMEM211Q6ICI0 200 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 B3GNT6Q6ZMB0 384 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 GRINAQ7Z429 371 aa11.98□□□□□ -0.49
MDC1-209ENST00000613547 FJX1Q86VR8 437 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms