RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 FOXK2Q01167 660 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 RPL6Q02878 288 aaKnown RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 GAS6Q14393 721 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 HES5Q5TA89 166 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 NLGN4YQ8NFZ3 816 aaPredicted RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 OR9A4Q8NGU2 314 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 LILRB4Q8NHJ6 448 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 RNF31Q96EP0 1072 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 LRRC3BQ96PB8 259 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SDF2Q99470 211 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 TEX101Q9BY14 249 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PRDM7Q9NQW5 492 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CPNE7Q9UBL6 633 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 COPS7AQ9UBW8 275 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 REV1Q9UBZ9 1251 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SERGEFQ9UGK8 458 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 POLHQ9Y253 713 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CACNG2Q9Y698 323 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 C11orf98E9PRG8 122 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PEX12O00623 359 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CSF3P09919 207 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 IGFALSP35858 605 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 MAP3K8P41279 467 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 DNASE1L1P49184 302 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 HSF2Q03933 536 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 EEF1A2Q05639 463 aaKnown RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 ASAH1Q13510 395 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 DUSP6Q16828 381 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 LEG1Q6P5S2 330 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 QSOX2Q6ZRP7 698 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PFN4Q8NHR9 129 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 OR2A14Q96R47 310 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 HOXD1Q9GZZ0 328 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SLA2Q9H6Q3 261 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 KIR3DX1Q9H7L2 352 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SLC25A19Q9HC21 320 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ASB6Q9NWX5 421 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 COMMD9Q9P000 198 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PRODH2Q9UF12 536 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 TESQ9UGI8 421 aaKnown RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 NRG2O14511 850 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 HCRTR2O43614 444 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SEMA4FO95754 770 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SOD1P00441 154 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 DNASE1P24855 282 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIG4-204ENST00000611712 GPR18Q14330 331 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TMEM69Q5SWH9 247 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 HBMQ6B0K9 141 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SLC35F2Q8IXU6 374 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 IL17RDQ8NFM7 739 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 OR10H5Q8NGA6 315 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 LMX1AQ8TE12 382 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 FCAMRQ8WWV6 532 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 METTL21AQ8WXB1 218 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 GHSRQ92847 366 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 NKD1Q969G9 470 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 KIAA1143Q96AT1 154 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 GPR174Q9BXC1 333 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 MKRN2Q9H000 416 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 FGF20Q9NP95 211 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 RXFP3Q9NSD7 469 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 DAPP1Q9UN19 280 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SCML1Q9UN30 329 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 URB1O60287 2271 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 A0A0J9YY10 115 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 PAHP00439 452 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 IFNA7P01567 189 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 CRYBA2P53672 197 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ERVK-25P63136 954 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 IRF3Q14653 427 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 MLC1Q15049 377 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TMPRSS12Q86WS5 348 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 OR5T3Q8NGG3 340 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CCL4L1Q8NHW4 92 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ABHD4Q8TB40 342 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 RSPRY1Q96DX4 576 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 DPYSL5Q9BPU6 564 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 PPIL3Q9H2H8 161 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 RANBP3Q9H6Z4 567 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 FBRSQ9HAH7 460 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 INPP5EQ9NRR6 644 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 GPR55Q9Y2T6 319 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 PCM1Q15154 2024 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 A0A1B0GWA3 101 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 PRAMEF25A6NGN4 478 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 I3L521 148 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 LRRTM2O43300 516 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ZNF823P16415 610 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 GIFP27352 417 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 DDOSTP39656 456 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 OPRD1P41143 372 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ADPRHP54922 357 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ARPC4P59998 168 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CTXN1P60606 82 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CDK5Q00535 292 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ERV3-1Q14264 604 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms