RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 CCDC22O60826 627 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 BCHEP06276 602 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 ETS2P15036 469 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 HTR3AP46098 478 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 CCR4P51679 360 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 MAP2K6P52564 334 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SUCLG1P53597 346 aaKnown RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 CLDN15P56746 228 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 QPRTQ15274 297 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 CDSNQ15517 529 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 MAPK11Q15759 364 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 LIN52Q52LA3 116 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 DHDDSQ86SQ9 333 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 GGNQ86UU5 652 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 OR5M1Q8NGP8 315 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 FBXO27Q8NI29 283 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SH3GL1Q99961 368 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 THUMPD3Q9BV44 507 aaKnown RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 SERINC1Q9NRX5 453 aa12.86□□□□□ -0.35
HDDC2-206ENST00000608461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-206ENST00000608461 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 OIP5O43482 229 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 CYP7B1O75881 506 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF136P52737 540 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 CLDN20P56880 219 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 TFF3Q07654 80 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 RBBP4Q09028 425 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 FOXF1Q12946 379 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 KLF10Q13118 480 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 CYLC2Q14093 348 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 SGCBQ16585 318 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 GCNT6Q5T4J0 391 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 RNF220Q5VTB9 566 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 BHLHE22Q8NFJ8 381 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 OR52P1PQ8NH57 321 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 ADGRG7Q96K78 797 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 CGREF1Q99674 301 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 SPATA5L1Q9BVQ7 753 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 ENKD1Q9H0I2 346 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 QRSL1Q9H0R6 528 aaKnown RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
HDDC2-206ENST00000608461 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-206ENST00000608461 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 MED12Q93074 2177 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CACNA1CQ13936 2221 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CDHR4A6H8M9 788 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SYT5O00445 386 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 EIF1AYO14602 144 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SEC14L5O43304 696 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 PGM3O95394 542 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 PABPC4LP0CB38 370 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 ARAFP10398 606 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 ASCL1P50553 236 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SESN3P58005 492 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 NFYCQ13952 458 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CTU2Q2VPK5 515 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 TRMT5Q32P41 509 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CRYBG3Q68DQ2 2970 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 GTF2IRD2BQ6EKJ0 949 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF550Q7Z398 422 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 GTF2IRD2Q86UP8 949 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms