RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TFAP2EQ6VUC0 442 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ZNF704Q6ZNC4 412 aaPredicted RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 FCRLAQ7L513 359 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 C6orf120Q7Z4R8 191 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 WFDC8Q8IUA0 241 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 NUDCD3Q8IVD9 361 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 CLECL1Q8IZS7 167 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 GABRG1Q8N1C3 465 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 CLEC4FQ8N1N0 589 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 SLC43A2Q8N370 569 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 STEAP2Q8NFT2 490 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 RFWD2Q8NHY2 731 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ZFP90Q8TF47 636 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 AENQ8WTP8 325 aaKnown RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 S100PBPQ96BU1 408 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 COX4I2Q96KJ9 171 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 TMEM109Q9BVC6 243 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 C20orf27Q9GZN8 174 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 NMUR2Q9GZQ4 415 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 LAT2Q9GZY6 243 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 SERHL2Q9H4I8 314 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 COQ10BQ9H8M1 238 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 ASIC5Q9NY37 505 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 KLHL13Q9P2N7 655 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 KCNE5Q9UJ90 142 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 RAI1Q7Z5J4 1906 aaPredicted RBP6.78□□□□□ -1.32
CUX1-219ENST00000606749 ARID1AO14497 2285 aa6.78□□□□□ -1.32
CUX1-219ENST00000606749 PRR14LQ5THK1 2151 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 A0A1W2PNR3 127 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 WDR91A4D1P6 747 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 TRIM64A6NGJ6 449 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 TRIM64BA6NI03 449 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF814B7Z6K7 855 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 RNASET2O00584 256 aaKnown RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 HS3ST1O14792 307 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 SMAD7O15105 426 aaKnown RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 SCN2BO60939 215 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 STX11O75558 287 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 UGT2B17O75795 530 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 AK1P00568 194 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ADAP00813 363 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 UBL4AP11441 157 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 SOAT1P35610 550 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 CASP9P55211 416 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 SESN3P58005 492 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ABCE1P61221 599 aaKnown RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 PHC1P78364 1004 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF844Q08AG5 666 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 SKP2Q13309 424 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ITGADQ13349 1161 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 CBFBQ13951 182 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 P2RY6Q15077 328 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 GPR68Q15743 365 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 CHI3L2Q15782 390 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 PDCD2Q16342 344 aaPredicted RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 ARHGAP11BQ3KRB8 267 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 AP1ARQ63HQ0 302 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ALKBH2Q6NS38 261 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 EMBQ6PCB8 327 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 OLIG3Q7RTU3 272 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF611Q8N823 705 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF614Q8N883 585 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF781Q8N8C0 355 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 TOR1AIP2Q8NFQ8 470 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 OR8J2Q8NGG1 315 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 LILRB1Q8NHL6 650 aaPredicted RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 RAB3IL1Q8TBN0 382 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 MIPOL1Q8TD10 442 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 TMEM171Q8WVE6 324 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 XAGE5Q8WWM1 108 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 HSD17B8Q92506 261 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 AKAP1Q92667 903 aaKnown RBP eCLIP6.77□□□□□ -1.33
CUX1-219ENST00000606749 ARL8AQ96BM9 186 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 PKNOX2Q96KN3 472 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 PPP1R36Q96LQ0 422 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZIM3Q96PE6 472 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 THUMPD3Q9BV44 507 aaKnown RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 OR51I1Q9H343 314 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 CXorf56Q9H5V9 222 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 ZNF701Q9NV72 531 aaPredicted RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 ING1Q9UK53 422 aaPredicted RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 MKLN1Q9UL63 735 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 PCDHGB4Q9UN71 923 aa6.77□□□□□ -1.33
CUX1-219ENST00000606749 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
CUX1-219ENST00000606749 NAV3Q8IVL0 2385 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 IGHV3-15A0A0B4J1V0 119 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 CENPVL1A0A0U1RR11 272 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 PRSS51A0A1B0GVH4 220 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 C9JVG2 144 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 ANKRD28O15084 1053 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 BIRC5O15392 142 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 CYTIPO60759 359 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 TMCC2O75069 709 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 CYP7B1O75881 506 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms