RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RPS6KA2Q15349 733 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ZNF791Q3KP31 576 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 CT45A2Q5DJT8 189 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 VASNQ6EMK4 673 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 C9orf106Q8NAJ2 232 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 OR5AK3PQ8NH89 298 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ZFP28Q8NHY6 868 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 FBXO30Q8TB52 745 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ROBO4Q8WZ75 1007 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 VPS33AQ96AX1 596 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 OTUB1Q96FW1 271 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 PRPF18Q99633 342 aaKnown RBP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 CXorf56Q9H5V9 222 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 EQTNQ9NQ60 294 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 SERHLQ9NQF3 203 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 SLC6A13Q9NSD5 602 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ATAD3AQ9NVI7 634 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 DDX18Q9NVP1 670 aaKnown RBP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 KLHL28Q9NXS3 571 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 ZIM2Q9NZV7 527 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 NTMQ9P121 344 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 CDC42EP3Q9UKI2 254 aa10.95□□□□□ -0.66
HLA-F-230ENST00000606273 BOKQ9UMX3 212 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-230ENST00000606273 RNASET2O00584 256 aaKnown RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 ACP2P11117 423 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 NCF2P19878 526 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 DRD4P21917 467 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 DRD5P21918 477 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 LSP1P33241 339 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 S100A3P33764 101 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 MAP3K8P41279 467 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 PPICP45877 212 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 CLNS1AP54105 237 aaKnown RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 PRKAG1P54619 331 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 FBXW4P57775 412 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 EGR3Q06889 387 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 FAM27E3Q08E93 113 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 ZNF155Q12901 538 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 GAB1Q13480 694 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 VEZF1Q14119 521 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 TSPYL5Q86VY4 417 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 MIER2Q8N344 545 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 NUP43Q8NFH3 380 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 PAQR8Q8TEZ7 354 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 C10orf82Q8WW14 230 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 CHMP6Q96FZ7 201 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 WDYHV1Q96HA8 205 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 LCORQ96JN0 433 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 RILPQ96NA2 401 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 BTBD9Q96Q07 612 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 OR52E6Q96RD3 313 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 SIKE1Q9BRV8 207 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 SFXN3Q9BWM7 321 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 RABEP2Q9H5N1 569 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 TAS2R9Q9NYW1 312 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 CAMK2AQ9UQM7 478 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 WIF1Q9Y5W5 379 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 SNX8Q9Y5X2 465 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 KCNE3Q9Y6H6 103 aa10.94□□□□□ -0.66
HLA-F-230ENST00000606273 NUP214P35658 2090 aaPredicted RBP10.94□□□□□ -0.66
HLA-F-230ENST00000606273 PRSS51A0A1B0GVH4 220 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 GXYLT2A0PJZ3 443 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 FRG2CA6NGY1 282 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 TO15178 435 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 CFLARO15519 480 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 EMC8O43402 210 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 TMCC2O75069 709 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 BCAS2O75934 225 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-230ENST00000606273 RCBTB2O95199 551 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 BPNT1O95861 308 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 IGKV1D-16P01601 117 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 GSNP06396 782 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 IFI6P09912 130 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 TROVE2P10155 538 aaKnown RBP eCLIP10.93□□□□□ -0.66
HLA-F-230ENST00000606273 ABCD3P28288 659 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 CCT3P49368 545 aaKnown RBP10.93□□□□□ -0.66
HLA-F-230ENST00000606273 POLR2JP52435 117 aaKnown RBP10.93□□□□□ -0.66
HLA-F-230ENST00000606273 ARFIP2P53365 341 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 CASP9P55211 416 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 GNGT1P63211 74 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 GTDC1Q4AE62 458 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 TIGD2Q4W5G0 525 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 PRAMEF20Q5VT98 475 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 MFSD12Q6NUT3 480 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 SLC2A7Q6PXP3 512 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 SZRD1Q7Z422 152 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 SLC44A2Q8IWA5 706 aaPredicted RBP10.93□□□□□ -0.66
HLA-F-230ENST00000606273 SLC16A11Q8NCK7 471 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 C17orf47Q8NEP4 570 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 OR10G3Q8NGC4 313 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 OR4A15Q8NGL6 344 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 SLC22A8Q8TCC7 542 aa10.93□□□□□ -0.66
HLA-F-230ENST00000606273 PIK3R3Q92569 461 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms