RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PADI1Q9ULC6 663 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 SCN2AQ99250 2005 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 PRAMEF27A3QJZ7 478 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 PMS2P1A4D2B8 440 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 TTC36A6NLP5 189 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 A8MUA0 341 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 C9orf172C9J069 976 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 HRKO00198 91 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 NME6O75414 186 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 ACP2P11117 423 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 MAP3K8P41279 467 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 EMDP50402 254 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 EFNB1P98172 346 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ZNF155Q12901 538 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 MLLT11Q13015 90 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 TARDBPQ13148 414 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■■■■□ 23
VRK3-223ENST00000601341 DUSP8Q13202 625 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 SYPL1Q16563 259 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 DUSP5Q16690 384 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 TMEM44Q2T9K0 475 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 CYP27C1Q4G0S4 372 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 GPAT3Q53EU6 434 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 HEPHL1Q6MZM0 1159 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 C16orf62Q7Z3J2 963 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 WDR53Q7Z5U6 358 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 LYSMD2Q8IV50 215 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ZNF615Q8N8J6 731 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 PRRG3Q9BZD7 231 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 B3GNT4Q9C0J1 378 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 OR8D2Q9GZM6 311 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 TRIM45Q9H8W5 580 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 C19orf25Q9UFG5 118 aaPredicted RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 DIMT1Q9UNQ2 313 aaKnown RBP10.8□□□□□ -0.68
VRK3-223ENST00000601341 SATB2Q9UPW6 733 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 KCNE3Q9Y6H6 103 aa10.8□□□□□ -0.68
VRK3-223ENST00000601341 ENTPD6O75354 484 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 NKX2-2O95096 273 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 DLGAP3O95886 979 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 AK1P00568 194 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 PSMA1P25786 263 aaKnown RBP10.79□□□□□ -0.68
VRK3-223ENST00000601341 IFNA8P32881 189 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 NOVA1P51513 510 aaKnown RBP10.79□□□□□ -0.68
VRK3-223ENST00000601341 SMSP52788 366 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 CDK5Q00535 292 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FUT5Q11128 374 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 SPHARQ15513 63 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 KLHL22Q53GT1 634 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FAAH2Q6GMR7 532 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FAM198BQ6UWH4 519 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 DEF8Q6ZN54 512 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 LANCL3Q6ZV70 420 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 ANKRD37Q7Z713 158 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 NANOGP1Q8N7R0 232 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 COX18Q8N8Q8 333 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 MORN4Q8NDC4 146 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 SLC2A12Q8TD20 617 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 GPR151Q8TDV0 419 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 CHAC2Q8WUX2 184 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 HOXB13Q92826 284 aaPredicted RBP10.79□□□□□ -0.68
VRK3-223ENST00000601341 CDS1Q92903 461 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 ITFG2Q969R8 447 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 VSTM2LQ96N03 204 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 LMF2Q9BU23 707 aaKnown RBP10.79□□□□□ -0.68
VRK3-223ENST00000601341 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
VRK3-223ENST00000601341 SPRY4Q9C004 299 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 OR51E2Q9H255 320 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FOLH1BQ9HBA9 442 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 NDUFB11Q9NX14 153 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 RHCGQ9UBD6 479 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 TRAPPC4Q9Y296 219 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 KNTC1P50748 2209 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FER1L5A0AVI2 2057 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 FAM186AA6NE01 2351 aa10.79□□□□□ -0.68
VRK3-223ENST00000601341 TEX51A0A1B0GUA7 166 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 H3BN98 237 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 BOLA2-SMG1P6H3BVE0 249 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 SLC30A4O14863 429 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 KIAA0513O60268 411 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 BRINP1O60477 761 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 TNFSF15O95150 251 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 DDAH2O95865 285 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 IGKV3-11P04433 115 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 TP53P04637 393 aaPredicted RBP10.78□□□□□ -0.68
VRK3-223ENST00000601341 DBTP11182 482 aaKnown RBP10.78□□□□□ -0.68
VRK3-223ENST00000601341 GABRA3P34903 492 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 GRK5P34947 590 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 GIPRP48546 466 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 PCYT1AP49585 367 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 SLC37A1P57057 533 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 FOXL2P58012 376 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 DEFA1P59665 94 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 DEFA3P59666 94 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 ZNF91Q05481 1191 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 MED22Q15528 200 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 ARHGAP11BQ3KRB8 267 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 TMEM205Q6UW68 189 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 CCDC190Q86UF4 302 aa10.78□□□□□ -0.68
VRK3-223ENST00000601341 C16orf52Q8NHV5 167 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms