RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 OR1E2P47887 323 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 SSR4P51571 173 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 VLDLRP98155 873 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 SLC34A1Q06495 639 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 PLCXD2Q0VAA5 305 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 DECR1Q16698 335 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 ZNF311Q5JNZ3 666 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 ZNF836Q6ZNA1 936 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 AMIGO2Q86SJ2 522 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 ZDHHC21Q8IVQ6 265 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 PEX5LQ8IYB4 626 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 OR4D11Q8NGI4 311 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 LILRB4Q8NHJ6 448 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 GEMIN6Q8WXD5 167 aaKnown RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 RND1Q92730 232 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 POP5Q969H6 163 aaKnown RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 G6PC3Q9BUM1 346 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 PINK1Q9BXM7 581 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 SEMA6AQ9H2E6 1030 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 CACYBPQ9HB71 228 aaKnown RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 TIMMDC1Q9NPL8 285 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 POLE3Q9NRF9 147 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 FLRT3Q9NZU0 649 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 ABCG2Q9UNQ0 655 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 RNF6Q9Y252 685 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
UPF1-208ENST00000600012 SH3GLB1Q9Y371 365 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 AGAP5A6NIR3 686 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 TMEM200CA6NKL6 621 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 CLDN24A6NM45 220 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 M0R3H8 397 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 TO15178 435 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 ACOX3O15254 700 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 FRS3O43559 492 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 ZNF354AO60765 605 aaPredicted RBP11.54□□□□□ -0.56
UPF1-208ENST00000600012 REM1O75628 298 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 ZFAND5O76080 213 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 DIRAS1O95057 198 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 IL33O95760 270 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 FABP3P05413 133 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 KRT20P35900 424 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 MAGEA2P43356 314 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 GPR85P60893 370 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.54□□□□□ -0.56
UPF1-208ENST00000600012 LIN52Q52LA3 116 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 PDZK1Q5T2W1 519 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 DESI1Q6ICB0 168 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 DHRS4L2Q6PKH6 230 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 MDGA2Q7Z553 956 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 TSEN54Q7Z6J9 526 aaKnown RBP11.54□□□□□ -0.56
UPF1-208ENST00000600012 CARM1Q86X55 608 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 LACC1Q8IV20 430 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 GPALPP1Q8IXQ4 340 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 ZNF614Q8N883 585 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 PSD4Q8NDX1 1056 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 OR5L2Q8NGL0 311 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 PROX1Q92786 737 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 TP53INP1Q96A56 240 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 OMA1Q96E52 524 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 HSPBAP1Q96EW2 488 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 C7orf34Q96L11 122 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 ADOQ96SZ5 270 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 WFDC6Q9BQY6 131 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 C6orf203Q9P0P8 240 aaPredicted RBP11.54□□□□□ -0.56
UPF1-208ENST00000600012 BAG5Q9UL15 447 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 CHST2Q9Y4C5 530 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 HRH3Q9Y5N1 445 aa11.54□□□□□ -0.56
UPF1-208ENST00000600012 FAM90A27PA6NNH2 459 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 ACOT7O00154 380 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 TSPAN2O60636 221 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 TOXO94900 526 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 NADKO95544 446 aaPredicted RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 THBS1P07996 1170 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 GUSBP08236 651 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 FCGR1AP12314 374 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 CYP4B1P13584 511 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 IL7RP16871 459 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 FASP25445 335 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 ABCD3P28288 659 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 IL12BP29460 328 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 PRKAR1BP31321 381 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 YAP1P46937 504 aaKnown RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 EEF1A1P68104 462 aaKnown RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 TFF3Q07654 80 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 TRIP10Q15642 601 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 ATP6AP1Q15904 470 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 GRAMD1BQ3KR37 738 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 IQCCQ4KMZ1 466 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 MRPL2Q5T653 305 aaKnown RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 LPCAT4Q643R3 524 aa11.53□□□□□ -0.56
UPF1-208ENST00000600012 RBM45Q8IUH3 476 aaKnown RBP11.53□□□□□ -0.56
UPF1-208ENST00000600012 C17orf47Q8NEP4 570 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms