RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 FAM230AA0A1W2PPH8 454 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 NUDT21O43809 227 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 TACR3P29371 465 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 MAP2K4P45985 399 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 FNTBP49356 437 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 SELENOWP63302 87 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 EIF3IQ13347 325 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 RSPO2Q6UXX9 243 aaPredicted RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 RPS27LQ71UM5 84 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 APIPQ96GX9 242 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 CMSS1Q9BQ75 279 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 ETAA1Q9NY74 926 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 A6NHS1 94 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 ERVPABLB-1P60509 514 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 PPP1R8Q12972 351 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 TMEM240Q5SV17 173 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 STEAP3Q658P3 488 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 TSPYL5Q86VY4 417 aaPredicted RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 CMIPQ8IY22 773 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 BEST3Q8N1M1 668 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 CRYABP02511 175 aaKnown RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 H2AFB2P0C5Z0 115 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 OR1D4P47884 311 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 FAM83HQ6ZRV2 1179 aaPredicted RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 DNAJA3Q96EY1 480 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 HES7Q9BYE0 225 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 OSBPL7Q9BZF2 842 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 ERVK13-1Q9NX77 482 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 POU3F1Q03052 451 aaPredicted RBP19.16■□□□□ 0.66
UPF1-207ENST00000599848 TAS1R1Q7RTX1 841 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 DPH1Q9BZG8 443 aa19.16■□□□□ 0.66
UPF1-207ENST00000599848 ARGFXA6NJG6 315 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 SLC34A2O95436 690 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 GLB1P16278 677 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 GPR157Q5UAW9 335 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CLECL1Q8IZS7 167 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 RSPRY1Q96DX4 576 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 STARD5Q9NSY2 213 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 SCAF4O95104 1147 aaKnown RBP19.15■□□□□ 0.66
UPF1-207ENST00000599848 F11P03951 625 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 AMY2AP04746 511 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CSF1P09603 554 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CD34P28906 385 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CCNJQ5T5M9 372 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 Q8N402 240 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 BPIFA2Q96DR5 249 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 M0R233 179 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 GLCEO94923 617 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 PBX2P40425 430 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 KMT5CQ86Y97 462 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 IFI44Q8TCB0 444 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 SLC41A2Q96JW4 573 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 NFS1Q9Y697 457 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 LDB3O75112 727 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 RNF144AP50876 292 aaPredicted RBP19.15■□□□□ 0.66
UPF1-207ENST00000599848 AGAP7PQ5VUJ5 663 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CHTF18Q8WVB6 975 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 MYLIPQ8WY64 445 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CDS1Q92903 461 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 AGAP4Q96P64 663 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 MOKQ9UQ07 419 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 F7P08709 466 aaPredicted RBP19.15■□□□□ 0.66
UPF1-207ENST00000599848 NOVA1P51513 510 aaKnown RBP19.15■□□□□ 0.66
UPF1-207ENST00000599848 ZP2Q05996 745 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 RPS19BP1Q86WX3 136 aaKnown RBP19.15■□□□□ 0.66
UPF1-207ENST00000599848 DOK4Q8TEW6 326 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 CORO2AQ92828 525 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 ZNF286AQ9HBT8 521 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 GPR83Q9NYM4 423 aa19.15■□□□□ 0.66
UPF1-207ENST00000599848 TK1P04183 234 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 DBHP09172 617 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 OR8U9P0C7N5 309 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 PVRP15151 417 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 LSSP48449 732 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 KCNJ10P78508 379 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 PPP1R3AQ16821 1122 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 UTS2BQ765I0 119 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 SERPINA11Q86U17 422 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 SLC6A18Q96N87 628 aa19.14■□□□□ 0.66
UPF1-207ENST00000599848 ZNF443Q9Y2A4 671 aaPredicted RBP19.14■□□□□ 0.66
UPF1-207ENST00000599848 LOC285095A0A1B0GVY8 99 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 SLC35F4A4IF30 521 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 SIRPAP78324 504 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 CST9Q5W186 159 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 HBMQ6B0K9 141 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 DPY19L4Q7Z388 723 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 IGDCC3Q8IVU1 814 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 CNTN4Q8IWV2 1026 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 TSSK2Q96PF2 358 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 CTSCP53634 463 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 LCN8Q6JVE9 175 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 ZNF480Q8WV37 535 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 GAB3Q8WWW8 586 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 DNAJC15Q9Y5T4 150 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 HCRTR1O43613 425 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 NOVP48745 357 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 S100A12P80511 92 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 OR2A12Q8NGT7 310 aa19.14■□□□□ 0.65
UPF1-207ENST00000599848 ASB11Q8WXH4 323 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms