RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PLXDC2Q6UX71 529 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 NET1Q7Z628 596 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 SERPINA11Q86U17 422 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 CDRT4Q8N9R6 151 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 C17orf47Q8NEP4 570 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 PNPT1Q8TCS8 783 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 ADIPOR1Q96A54 375 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 ZNF583Q96ND8 569 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 CDRT15Q96T59 188 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 SH2D2AQ9NP31 389 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 ZNF226Q9NYT6 803 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 COPS7AQ9UBW8 275 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 CD300AQ9UGN4 299 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 PRPF19Q9UMS4 504 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 GPR55Q9Y2T6 319 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
SHKBP1-218ENST00000598907 HMGN4O00479 90 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 CT45A8P0DMV1 189 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 CT45A9P0DMV2 189 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 ETFAP13804 333 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 DRD5P21918 477 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 CRYGSP22914 178 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 PPICP45877 212 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 EEFSECP57772 596 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 RPS26P62854 115 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 RNF4P78317 190 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 ADRM1Q16186 407 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SPATS1Q496A3 300 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 CT45A2Q5DJT8 189 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 AP1ARQ63HQ0 302 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 PGM2L1Q6PCE3 622 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 BTLAQ7Z6A9 289 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 ARHGAP24Q8N264 748 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SLC16A11Q8NCK7 471 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 FAM13CQ8NE31 585 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SLC35A4Q96G79 324 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 BTBD9Q96Q07 612 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 OR7D2Q96RA2 312 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 STACQ99469 402 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 BEX2Q9BXY8 128 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 ITPAQ9BY32 194 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 CADM1Q9BY67 442 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 PIGUQ9H490 435 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 EQTNQ9NQ60 294 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 DUSP22Q9NRW4 184 aa12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 FAF1Q9UNN5 650 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-218ENST00000598907 EXPH5Q8NEV8 1989 aa12.52□□□□□ -0.4
SHKBP1-218ENST00000598907 PRAMEF27A3QJZ7 478 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 DUXAA6NLW8 204 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 TO15178 435 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 NUDT7P0C024 238 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 HSD17B1P14061 328 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 PAX1P15863 534 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 CRATP43155 626 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 KHKP50053 298 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 CASP9P55211 416 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 LIPEQ05469 1076 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 FAM27E3Q08E93 113 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 TOMM20Q15388 145 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 MAPK11Q15759 364 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 FXNQ16595 210 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 DUSP5Q16690 384 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 PIGGQ5H8A4 983 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 SLC29A4Q7RTT9 530 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNF550Q7Z398 422 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 SZRD1Q7Z422 152 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 PTOV1Q86YD1 416 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 OR5D16Q8NGK9 328 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 OR10A6Q8NH74 314 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 ECSITQ9BQ95 431 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 SPATA9Q9BWV2 254 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 WWTR1Q9GZV5 400 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 TMEM38AQ9H6F2 299 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.41
SHKBP1-218ENST00000598907 C2orf92A0A1B0GVN3 265 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 FRG2CA6NGY1 282 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 DNAJA2O60884 412 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 SMNDC1O75940 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 AGR2O95994 175 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ALOX5P09917 674 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 FREM3P0C091 2139 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms