RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MRGPRX4Q96LA9 322 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 ZNF350Q9GZX5 532 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 SAP130Q9H0E3 1048 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 TIGARQ9NQ88 270 aa13.48□□□□□ -0.25
LIG1-215ENST00000597901 MARCOQ9UEW3 520 aaPredicted RBP13.48□□□□□ -0.25
LIG1-215ENST00000597901 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CENPVL1A0A0U1RR11 272 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 A0A1W2PPR1 153 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 PRAMEF27A3QJZ7 478 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 GJE1A6NN92 205 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 C9JVG2 144 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 DNAJA2O60884 412 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CYP7B1O75881 506 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CSTAP01040 98 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
LIG1-215ENST00000597901 NID1P14543 1247 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CHI3L1P36222 383 aaPredicted RBP13.47□□□□□ -0.25
LIG1-215ENST00000597901 PPP2R2AP63151 447 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 CBFBQ13951 182 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 TYW3Q6IPR3 259 aaKnown RBP13.47□□□□□ -0.25
LIG1-215ENST00000597901 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
LIG1-215ENST00000597901 MBD6Q96DN6 1003 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 OR52E6Q96RD3 313 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 INPP5KQ9BT40 448 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 MED18Q9BUE0 208 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 KLHL4Q9C0H6 718 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 POLE3Q9NRF9 147 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 C6orf203Q9P0P8 240 aaPredicted RBP13.47□□□□□ -0.25
LIG1-215ENST00000597901 WDR45Q9Y484 360 aa13.47□□□□□ -0.25
LIG1-215ENST00000597901 MED12LQ86YW9 2145 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 MPDZO75970 2070 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 ETV2O00321 342 aaPredicted RBP13.46□□□□□ -0.25
LIG1-215ENST00000597901 ATE1O95260 518 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 RAF1P04049 648 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 GSNP06396 782 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 PGRP06401 933 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 CCR4P51679 360 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 CHRNEQ04844 493 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 SKP2Q13309 424 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 KEAP1Q14145 624 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 NXNQ6DKJ4 435 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 ZNF550Q7Z398 422 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 RNF130Q86XS8 419 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 TMCO5AQ8N6Q1 288 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 ZNF75CPQ92670 426 aaPredicted RBP13.46□□□□□ -0.25
LIG1-215ENST00000597901 CPNE4Q96A23 557 aaPredicted RBP13.46□□□□□ -0.25
LIG1-215ENST00000597901 ARL8AQ96BM9 186 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 REXO5Q96IC2 774 aaKnown RBP13.46□□□□□ -0.25
LIG1-215ENST00000597901 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
LIG1-215ENST00000597901 PANX1Q96RD7 426 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 ZBTB18Q99592 522 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.25
LIG1-215ENST00000597901 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 UQCRHLA0A096LP55 91 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 HMGN4O00479 90 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 SIAH2O43255 324 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 SLC22A3O75751 556 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 PRKD3O94806 890 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 CD99P14209 185 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 PGCP20142 388 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 ENPP1P22413 925 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 CRYGSP22914 178 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 CCKARP32238 428 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 PGM1P36871 562 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 CDKN2CP42773 168 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 KHKP50053 298 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 SESN3P58005 492 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 LRRC74AQ0VAA2 488 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 FUT5Q11128 374 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 ZNF239Q16600 458 aaKnown RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 SLC9B1Q4ZJI4 515 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 GPAT3Q53EU6 434 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 FRRS1Q6ZNA5 592 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 BEND4Q6ZU67 534 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 ZNF619Q8N2I2 560 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 TRIML2Q8N7C3 387 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 GLB1L3Q8NCI6 653 aaPredicted RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 ABHD3Q8WU67 409 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 OIT3Q8WWZ8 545 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 TMEM234Q8WY98 164 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 ZC3HAV1LQ96H79 300 aaKnown RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 QRSL1Q9H0R6 528 aaKnown RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
LIG1-215ENST00000597901 ACER3Q9NUN7 267 aa13.45□□□□□ -0.26
LIG1-215ENST00000597901 NUP214P35658 2090 aaPredicted RBP13.44□□□□□ -0.26
LIG1-215ENST00000597901 A0A1W2PNR3 127 aa13.44□□□□□ -0.26
LIG1-215ENST00000597901 KLF11O14901 512 aa13.44□□□□□ -0.26
LIG1-215ENST00000597901 KIAA0513O60268 411 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms