RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FAAHO00519 579 aa13□□□□□ -0.33
VRK3-213ENST00000597215 CXCR6O00574 342 aa13□□□□□ -0.33
VRK3-213ENST00000597215 TPST1O60507 370 aa13□□□□□ -0.33
VRK3-213ENST00000597215 SLC19A2O60779 497 aa13□□□□□ -0.33
VRK3-213ENST00000597215 GMNNO75496 209 aa13□□□□□ -0.33
VRK3-213ENST00000597215 LINGO3P0C6S8 592 aa13□□□□□ -0.33
VRK3-213ENST00000597215 PRKCAP17252 672 aa13□□□□□ -0.33
VRK3-213ENST00000597215 KDELR2P33947 212 aa13□□□□□ -0.33
VRK3-213ENST00000597215 KCNJ5P48544 419 aa13□□□□□ -0.33
VRK3-213ENST00000597215 B3GALT5-AS1P59052 145 aa13□□□□□ -0.33
VRK3-213ENST00000597215 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
VRK3-213ENST00000597215 EPS8Q12929 822 aa13□□□□□ -0.33
VRK3-213ENST00000597215 FOXF1Q12946 379 aa13□□□□□ -0.33
VRK3-213ENST00000597215 BNIP1Q12981 228 aa13□□□□□ -0.33
VRK3-213ENST00000597215 MRPL49Q13405 166 aaKnown RBP13□□□□□ -0.33
VRK3-213ENST00000597215 TOMM34Q15785 309 aaPredicted RBP13□□□□□ -0.33
VRK3-213ENST00000597215 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
VRK3-213ENST00000597215 DNAL1Q4LDG9 190 aa13□□□□□ -0.33
VRK3-213ENST00000597215 LRRC23Q53EV4 343 aaPredicted RBP13□□□□□ -0.33
VRK3-213ENST00000597215 VASNQ6EMK4 673 aa13□□□□□ -0.33
VRK3-213ENST00000597215 ENPP6Q6UWR7 440 aa13□□□□□ -0.33
VRK3-213ENST00000597215 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
VRK3-213ENST00000597215 RNF148Q8N7C7 305 aa13□□□□□ -0.33
VRK3-213ENST00000597215 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
VRK3-213ENST00000597215 RNF145Q96MT1 663 aa13□□□□□ -0.33
VRK3-213ENST00000597215 UGT2B28Q9BY64 529 aa13□□□□□ -0.33
VRK3-213ENST00000597215 CD300AQ9UGN4 299 aa13□□□□□ -0.33
VRK3-213ENST00000597215 PACSIN3Q9UKS6 424 aa13□□□□□ -0.33
VRK3-213ENST00000597215 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
VRK3-213ENST00000597215 PRPF19Q9UMS4 504 aaKnown RBP13□□□□□ -0.33
VRK3-213ENST00000597215 ZNF835Q9Y2P0 537 aa13□□□□□ -0.33
VRK3-213ENST00000597215 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 SHISA8B8ZZ34 492 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ETV2O00321 342 aaPredicted RBP12.99□□□□□ -0.33
VRK3-213ENST00000597215 AP3D1O14617 1153 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 PRRG2O14669 202 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ADAM11O75078 769 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ATP5HO75947 161 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 TPOP07202 933 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 C8BP07358 591 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 GKN3PP0CG01 181 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 BMP7P18075 431 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 GGT1P19440 569 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 TCN1P20061 433 aaPredicted RBP12.99□□□□□ -0.33
VRK3-213ENST00000597215 POU3F2P20265 443 aaPredicted RBP12.99□□□□□ -0.33
VRK3-213ENST00000597215 CD247P20963 164 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 GNLYP22749 145 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ELK4P28324 431 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ADH6P28332 368 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 CRYBA2P53672 197 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 CASP6P55212 293 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 SESN3P58005 492 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 ESPL1Q14674 2120 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 DUSP7Q16829 419 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 SLC25A53Q5H9E4 307 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 WLSQ5T9L3 541 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 Q6ZPB1 254 aaPredicted RBP12.99□□□□□ -0.33
VRK3-213ENST00000597215 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 OR5M1Q8NGP8 315 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 FAM57AQ8TBR7 257 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 RSPO3Q9BXY4 272 aaPredicted RBP12.99□□□□□ -0.33
VRK3-213ENST00000597215 ACER3Q9NUN7 267 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 EGFL7Q9UHF1 273 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 MAGEL2Q9UJ55 1249 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 BAG5Q9UL15 447 aa12.99□□□□□ -0.33
VRK3-213ENST00000597215 MED12Q93074 2177 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 H3BML4 177 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 GYG2O15488 501 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 ZNHIT1O43257 154 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 FRS3O43559 492 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 NTN1O95631 604 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 EPPINO95925 133 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 LGI1O95970 557 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 FESP07332 822 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 PEPDP12955 493 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 GP1BBP13224 206 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 ME2P23368 584 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 ACAA2P42765 397 aaKnown RBP12.98□□□□□ -0.33
VRK3-213ENST00000597215 UQCRFS1P47985 274 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 IDH2P48735 452 aaKnown RBP12.98□□□□□ -0.33
VRK3-213ENST00000597215 RASSF2P50749 326 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 DLX5P56178 289 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 RGS8P57771 180 aaPredicted RBP12.98□□□□□ -0.33
VRK3-213ENST00000597215 NCALDP61601 193 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 COPZ1P61923 177 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 BNIP2Q12982 314 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 CEACAM7Q14002 265 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 FXNQ16595 210 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 CD163Q86VB7 1156 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 COMTD1Q86VU5 262 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 PM20D2Q8IYS1 436 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 FAM156AQ8NDB6 213 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 POC1BQ8TC44 478 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 LZICQ8WZA0 190 aa12.98□□□□□ -0.33
VRK3-213ENST00000597215 PROX1Q92786 737 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms