RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 METTL7AQ9H8H3 244 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 NMNAT1Q9HAN9 279 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 HHATLQ9HCP6 504 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 HPF1Q9NWY4 346 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 VNN3Q9NY84 501 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 PDP1Q9P0J1 537 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 ABI3Q9P2A4 366 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 RPS6KB2Q9UBS0 482 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 TESQ9UGI8 421 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 CNOT11Q9UKZ1 510 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 CARD8Q9Y2G2 431 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 LYVE1Q9Y5Y7 322 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 NINQ8N4C6 2090 aa11.95□□□□□ -0.5
SHKBP1-209ENST00000595803 MAN1A2O60476 641 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 TPST2O60704 377 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 BCAS1O75363 584 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 CCNB2O95067 398 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 OR5F1O95221 314 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 PRG2P13727 222 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 UQCRBP14927 111 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 PRKACGP22612 351 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 RYKP34925 604 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC6A8P48029 635 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 C17orf67Q0P5P2 114 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 TRAM2Q15035 370 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 CD226Q15762 336 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 EXOC3L2Q2M3D2 409 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 NDUFAF6Q330K2 333 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 FGD3Q5JSP0 725 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 ATP1A1-AS1Q5TC04 95 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 FNDC7Q5VTL7 733 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 TBPL2Q6SJ96 375 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 RRM2BQ7LG56 351 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 GPALPP1Q8IXQ4 340 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 TMCO5AQ8N6Q1 288 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 OR10G3Q8NGC4 313 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 OR4C15Q8NGM1 316 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 RNF217Q8TC41 542 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 MAGEE2Q8TD90 523 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 GRHL3Q8TE85 626 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 DUSP19Q8WTR2 217 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 PSMF1Q92530 271 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC38A4Q969I6 547 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC41A3Q96GZ6 507 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 KLRF1Q9NZS2 232 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 SELENONQ9NZV5 590 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 ACAD8Q9UKU7 415 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 NTNG1Q9Y2I2 539 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
SHKBP1-209ENST00000595803 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SOCS2O14508 198 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 HCRTR2O43614 444 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SEMA7AO75326 666 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 RASAL1O95294 804 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 THRBP10828 461 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF26P17031 533 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ACAA2P42765 397 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ST13P50502 369 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 CCR4P51679 360 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 EPS8Q12929 822 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 DAG1Q14118 895 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 MICAQ29983 383 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 CRTC2Q53ET0 693 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC22A10Q63ZE4 541 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC30A6Q6NXT4 461 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF613Q6PF04 617 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 IZUMO2Q6UXV1 221 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 RTL4Q6ZR62 310 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 GDF7Q7Z4P5 450 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 EPHX4Q8IUS5 362 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 OFCC1Q8IZS5 231 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 HS3ST5Q8IZT8 346 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 TOR1AIP2Q8NFQ8 470 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 B4GALNT2Q8NHY0 566 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF563Q8TA94 476 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ADAMTS16Q8TE57 1224 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SH3YL1Q96HL8 342 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 DHRS1Q96LJ7 313 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 CCNL2Q96S94 520 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SECISBP2Q96T21 854 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 RBM4BQ9BQ04 359 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 RBM4Q9BWF3 364 aaKnown RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 OSBPL10Q9BXB5 764 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 RTN4RQ9BZR6 473 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 SMURF2Q9HAU4 748 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 POLHQ9Y253 713 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 MAGED1Q9Y5V3 778 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 ICE1Q9Y2F5 2266 aa11.93□□□□□ -0.5
SHKBP1-209ENST00000595803 A0A1W2PRQ8 180 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 C2orf72A6NCS6 295 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 A6NL46 340 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 H0YJX3 145 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 FAAHO00519 579 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms