RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TBX5Q99593 518 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 HCAR1Q9BXC0 346 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 ZNF350Q9GZX5 532 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 MED20Q9H944 212 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 C14orf105Q9NVL8 296 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 CLDND1Q9NY35 253 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 AKAP7Q9P0M2 348 aaPredicted RBP12.28□□□□□ -0.44
VRK3-209ENST00000594948 UBQLN2Q9UHD9 624 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 ST6GALNAC2Q9UJ37 374 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 FBXL21Q9UKT6 434 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 SPATA2Q9UM82 520 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 COL4A2P08572 1712 aa12.28□□□□□ -0.44
VRK3-209ENST00000594948 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 PRR19A6NJB7 356 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 RIIAD1A6NNX1 92 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 EPXP11678 715 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 CXCL3P19876 107 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 DNASE1P24855 282 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 NDUFS1P28331 727 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SRP9P49458 86 aaKnown RBP12.27□□□□□ -0.44
VRK3-209ENST00000594948 RAB8AP61006 207 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 NTHL1P78549 312 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 TNFRSF17Q02223 184 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SNTA1Q13424 505 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 OR1Q1Q15612 314 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 LTB4RQ15722 352 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 GRK1Q15835 563 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 ST3GAL2Q16842 350 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.44
VRK3-209ENST00000594948 FAM27D1Q5T7N8 215 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 MTSS1LQ765P7 747 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SLITRK4Q8IW52 837 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 OR8H3Q8N146 312 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SYS1Q8N2H4 156 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 EID2Q8N6I1 236 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 OR7G2Q8NG99 324 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 RPLP0P6Q8NHW5 317 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 ZFPM2Q8WW38 1151 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 XKR8Q9H6D3 395 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 DEC1Q9P2X7 70 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 SIGLEC7Q9Y286 467 aa12.27□□□□□ -0.44
VRK3-209ENST00000594948 ZC3H12DA2A288 527 aaKnown RBP12.27□□□□□ -0.45
VRK3-209ENST00000594948 CDHR4A6H8M9 788 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 J3QLW9 94 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 ZNF593O00488 134 aaPredicted RBP12.27□□□□□ -0.45
VRK3-209ENST00000594948 FLRT2O43155 660 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 PTP4A3O75365 173 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 TGM6O95932 706 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 CD3GP09693 182 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 IFI6P09912 130 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 ZNF19P17023 458 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 CEBPBP17676 345 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 POLR2CP19387 275 aaPredicted RBP12.27□□□□□ -0.45
VRK3-209ENST00000594948 C4BPBP20851 252 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 NT5EP21589 574 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 HTR2AP28223 471 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 BMP8BP34820 402 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 DGCR2P98153 550 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 BAMBIQ13145 260 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 GAB4Q2WGN9 574 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 WDR88Q6ZMY6 472 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
VRK3-209ENST00000594948 FAM71CQ8NEG0 241 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 C17orf47Q8NEP4 570 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 NT5CQ8TCD5 201 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 SMPDL3BQ92485 455 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 LRRC3BQ96PB8 259 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 IFT27Q9BW83 186 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 PHPT1Q9NRX4 125 aaPredicted RBP12.27□□□□□ -0.45
VRK3-209ENST00000594948 MED31Q9Y3C7 131 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 SPEF1Q9Y4P9 236 aa12.27□□□□□ -0.45
VRK3-209ENST00000594948 LOC105369274A0A096LPK9 316 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 TRABD2BA6NFA1 517 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 REM1O75628 298 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 ECDO95905 644 aaPredicted RBP12.26□□□□□ -0.45
VRK3-209ENST00000594948 AK1P00568 194 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 POU2F2P09086 479 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 UCHL1P09936 223 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 NID1P14543 1247 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 ZNF3P17036 446 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 ATF1P18846 271 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 ERVFC1P60507 584 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 RPS7P62081 194 aaKnown RBP12.26□□□□□ -0.45
VRK3-209ENST00000594948 ACTA2P62736 377 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 ACTG2P63267 376 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 DHODHQ02127 395 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 SNTB2Q13425 540 aaKnown RBP12.26□□□□□ -0.45
VRK3-209ENST00000594948 RPE65Q16518 533 aa12.26□□□□□ -0.45
VRK3-209ENST00000594948 DUSP5Q16690 384 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms