RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 THUMPD1Q9NXG2 353 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 ELOVL5Q9NYP7 299 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 NDRG3Q9UGV2 375 aa15.93■□□□□ 0.14
SHKBP1-204ENST00000594862 AKAP9Q99996 3911 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 PCNX3Q9H6A9 2034 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 FAM234BA2RU67 622 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 A6NNC1 897 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 HMGN4O00479 90 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 DNAJA2O60884 412 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 CTAG2O75638 210 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 ANP32DO95626 131 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 CPOXP36551 454 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 POLR2JP52435 117 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 QPRTQ15274 297 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 GUSBP1Q15486 140 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 CTU2Q2VPK5 515 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 PPP4R4Q6NUP7 873 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 OR6K3Q8NGY3 331 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 RFWD2Q8NHY2 731 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 FBXO27Q8NI29 283 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 STARD4Q96DR4 205 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 DACH2Q96NX9 599 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 OR52B2Q96RD2 323 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 CCDC28BQ9BUN5 200 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 POLDIP3Q9BY77 421 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 EXOSC3Q9NQT5 275 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 SERINC1Q9NRX5 453 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 INTS9Q9NV88 658 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 TMEM45AQ9NWC5 275 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 DNAJB12Q9NXW2 375 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 CALML5Q9NZT1 146 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 PROCRQ9UNN8 238 aa15.92■□□□□ 0.14
SHKBP1-204ENST00000594862 TNFSF11O14788 317 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 OIP5O43482 229 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 CXCL13O43927 109 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SS18L1O75177 396 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 NTN1O95631 604 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC7A1P30825 629 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 KIR2DL2P43627 348 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC6A8P48029 635 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 CTBP2P56545 445 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 CARD18P57730 90 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 KRTAP10-9P60411 292 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SIRPAP78324 504 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 C3orf33Q6P1S2 294 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 PLXDC2Q6UX71 529 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 FRRS1Q6ZNA5 592 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 LRRC74BQ6ZQY2 392 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 FAM71CQ8NEG0 241 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SLC25A43Q8WUT9 341 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 STON2Q8WXE9 905 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 TACO1Q9BSH4 297 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 INPP5KQ9BT40 448 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 CLEC4MQ9H2X3 399 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 RAD21L1Q9H4I0 556 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 TMEM185BQ9H7F4 350 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 GP6Q9HCN6 339 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 RASSF1Q9NS23 344 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 PRDM4Q9UKN5 801 aa15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 SPIN1Q9Y657 262 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-204ENST00000594862 CCDC168Q8NDH2 2452 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 ZFHX3Q15911 3703 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 A0A0J9YW62 118 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 FAM221AA4D161 298 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 TMEM247A6NEH6 219 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 C9JVG2 144 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 CYP7B1O75881 506 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 AQP8O94778 261 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 H6PDO95479 791 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 UBTFL6P0CB48 400 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 UQCRBP14927 111 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 FKBP2P26885 142 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 SFTPDP35247 375 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 CD79BP40259 229 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 CDKN2CP42773 168 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 CASP9P55211 416 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 FUT5Q11128 374 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 RNPS1Q15287 305 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 NDUFAF6Q330K2 333 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 TIGD2Q4W5G0 525 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 FBXW10Q5XX13 1052 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 VWA1Q6PCB0 445 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 BTLAQ7Z6A9 289 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 STK32CQ86UX6 486 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 ZFP90Q8TF47 636 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 OSTF1Q92882 214 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 MARK4Q96L34 752 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 THUMPD3Q9BV44 507 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 CACYBPQ9HB71 228 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 P2RX2Q9UBL9 471 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 KCNE5Q9UJ90 142 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 HIVEP1P15822 2718 aa15.9■□□□□ 0.14
SHKBP1-204ENST00000594862 SH3D21A4FU49 640 aa15.89■□□□□ 0.13
SHKBP1-204ENST00000594862 CASKO14936 926 aa15.89■□□□□ 0.13
SHKBP1-204ENST00000594862 GSNP06396 782 aa15.89■□□□□ 0.13
SHKBP1-204ENST00000594862 NR2F1P10589 423 aa15.89■□□□□ 0.13
SHKBP1-204ENST00000594862 IL11P20809 199 aa15.89■□□□□ 0.13
SHKBP1-204ENST00000594862 PGM1P36871 562 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms