RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PLA1AQ53H76 456 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 FCRLBQ6BAA4 426 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 FCRL6Q6DN72 434 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 MRM1Q6IN84 353 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 REEP3Q6NUK4 255 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 SLC30A8Q8IWU4 369 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 EIF4E3Q8N5X7 224 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 HORMAD2Q8N7B1 307 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 UXS1Q8NBZ7 420 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 SGK3Q96BR1 496 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 THSD1Q9NS62 852 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 SIRT3Q9NTG7 399 aaPredicted RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 PURGQ9UJV8 347 aaKnown RBP14.3□□□□□ -0.12
PNKP-204ENST00000594661 ATG4BQ9Y4P1 393 aa14.3□□□□□ -0.12
PNKP-204ENST00000594661 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 KIR2DS5A0A0G2JLQ3 304 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 A0A0G2JNG1 304 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 HNRNPCL2B2RXH8 293 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 C5orf58C9J3I9 102 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 KIR2DS3K7RE56 304 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 PLATP00750 562 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 LSSP48449 732 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 MXD1Q05195 221 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 KIR2DS5Q14953 304 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 FRMPD2BQ6IN97 320 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 SLC27A4Q6P1M0 643 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 CNIH2Q6PI25 160 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 ATRAIDQ6UW56 229 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 HSD17B13Q7Z5P4 300 aaPredicted RBP14.29□□□□□ -0.12
PNKP-204ENST00000594661 BVESQ8NE79 360 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 SLC38A2Q96QD8 506 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 FEVQ99581 238 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 HCN3Q9P1Z3 774 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 FBXW2Q9UKT8 454 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 CCDC88CQ9P219 2028 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 A0A1W2PR48 441 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 METTL12A8MUP2 240 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 J3KTA2 159 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 P2RX6O15547 441 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 TNFSF14O43557 240 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 B4GALT2O60909 372 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 DHFRP00374 187 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 BCHEP06276 602 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 FABP1P07148 127 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 PVRP15151 417 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 DNASE1P24855 282 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
PNKP-204ENST00000594661 STXBP1P61764 594 aaKnown RBP14.29□□□□□ -0.12
PNKP-204ENST00000594661 FGL1Q08830 312 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
PNKP-204ENST00000594661 FIGLAQ6QHK4 219 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 C6orf120Q7Z4R8 191 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 OR10G2Q8NGC3 310 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 PIP5K1AQ99755 562 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 BCL2L14Q9BZR8 327 aa14.29□□□□□ -0.12
PNKP-204ENST00000594661 TXNL4BQ9NX01 149 aaKnown RBP14.29□□□□□ -0.12
PNKP-204ENST00000594661 MEIKINA0A087WXM9 373 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 B4DGG1 531 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 PGRMC2O15173 223 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 AIFM1O95831 613 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 DRD2P14416 443 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 CD27P26842 260 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 ARHGDIBP52566 201 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 ATP12AP54707 1039 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 PPP1CAP62136 330 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
PNKP-204ENST00000594661 P2RY14Q15391 338 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 EXOC3L2Q2M3D2 409 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 BCL2L15Q5TBC7 163 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 C18orf63Q68DL7 685 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 ZNF730Q6ZMV8 503 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 SLC5A8Q8N695 610 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 FAM46DQ8NEK8 389 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 OR4C15Q8NGM1 316 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 TMEM163Q8TC26 289 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 ZDHHC1Q8WTX9 485 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 SLC38A5Q8WUX1 472 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 RAB8BQ92930 207 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 SHDQ96IW2 340 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 CXorf58Q96LI9 332 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 OR2M2Q96R28 347 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 OR2A5Q96R48 311 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 FAIM2Q9BWQ8 316 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 PRDM6Q9NQX0 595 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 MBD2Q9UBB5 411 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 PFDN2Q9UHV9 154 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 SCP2D1Q9UJQ7 156 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 COL6A3P12111 3177 aa14.28□□□□□ -0.12
PNKP-204ENST00000594661 A0A1W2PR77 199 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 AIPO00170 330 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 GNB5O14775 395 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 NMBP08949 121 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 ZNF888P0CJ79 500 aaPredicted RBP14.27□□□□□ -0.12
PNKP-204ENST00000594661 CKMT1AP12532 417 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 CXCL3P19876 107 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 RGS19P49795 217 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 BLKP51451 505 aa14.27□□□□□ -0.12
PNKP-204ENST00000594661 ARFIP1P53367 373 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms