RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR2L13Q8N349 312 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SAMD12Q8N8I0 201 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 TOR1AIP2Q8NFQ8 470 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 HSD17B8Q92506 261 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 BADQ92934 168 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 KISS1RQ969F8 398 aaPredicted RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 RANBP3Q9H6Z4 567 aaPredicted RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 TRIM36Q9NQ86 728 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 KCMF1Q9P0J7 381 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RASD1Q9Y272 281 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 CHD9Q3L8U1 2897 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 P2RX6O15547 441 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 AGR2O95994 175 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 ADH1BP00325 375 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 PDGFAP04085 211 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 ENPP1P22413 925 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 FCARP24071 287 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 AK4P27144 223 aaPredicted RBP15.29■□□□□ 0.04
LIG1-206ENST00000594067 THBS2P35442 1172 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 SEC13P55735 322 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 IKZF1Q13422 519 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 NTRK2Q16620 822 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 MRPL2Q5T653 305 aaKnown RBP15.29■□□□□ 0.04
LIG1-206ENST00000594067 OAFQ86UD1 273 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 GPR135Q8IZ08 494 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 OR8H3Q8N146 312 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 OR13C2Q8NGS9 318 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 PTP4A1Q93096 173 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 ABHD1Q96SE0 405 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 IFT27Q9BW83 186 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 KIR3DX1Q9H7L2 352 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 EMC7Q9NPA0 242 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 NUDT15Q9NV35 164 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 CLDND1Q9NY35 253 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 NTMQ9P121 344 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 DPP7Q9UHL4 492 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 ZNF222Q9UK12 451 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 CACNG2Q9Y698 323 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 RAF1P04049 648 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 CLUP10909 449 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 SRP9P49458 86 aaKnown RBP15.29■□□□□ 0.04
LIG1-206ENST00000594067 RPS15AP62244 130 aaKnown RBP15.29■□□□□ 0.04
LIG1-206ENST00000594067 GALEQ14376 348 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 CDONQ4KMG0 1287 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 EIPR1Q53HC9 387 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 FBXO42Q6P3S6 717 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 SMAD5Q99717 465 aaKnown RBP15.29■□□□□ 0.04
LIG1-206ENST00000594067 KCNE5Q9UJ90 142 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 COLEC10Q9Y6Z7 277 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
LIG1-206ENST00000594067 EEF1E1O43324 174 aaKnown RBP15.28■□□□□ 0.04
LIG1-206ENST00000594067 TPOP07202 933 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 CXCL3P19876 107 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 STOMP27105 288 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 NOS3P29474 1203 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 TALDO1P37837 337 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 PITPNBP48739 271 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 FOXK2Q01167 660 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 TMEM240Q5SV17 173 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 RPTNQ6XPR3 784 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 RD3Q7Z3Z2 195 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 FN3KQ9H479 309 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 TRAV27A0A087WT01 109 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.28■□□□□ 0.04
LIG1-206ENST00000594067 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 PRR23D1E9PI22 279 aaPredicted RBP15.28■□□□□ 0.04
LIG1-206ENST00000594067 J3QLW9 94 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 SLC35G6P0C7Q6 338 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 PRR23D2P0DMB1 279 aaPredicted RBP15.28■□□□□ 0.04
LIG1-206ENST00000594067 ZNF19P17023 458 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 DCST2Q5T1A1 773 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 SFXN4Q6P4A7 337 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 FIGNL1Q6PIW4 674 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 KRT74Q7RTS7 529 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 CEACAM19Q7Z692 300 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 ZNF619Q8N2I2 560 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 CYB561A3Q8NBI2 242 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 C17orf47Q8NEP4 570 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 SORCS2Q96PQ0 1159 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 TEAD3Q99594 435 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 PLA2G2FQ9BZM2 168 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 ZNF350Q9GZX5 532 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 OR6C2Q9NZP2 312 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 FBXL4Q9UKA2 621 aa15.28■□□□□ 0.04
LIG1-206ENST00000594067 LDB3O75112 727 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 SCO1O75880 301 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 LYPD3O95274 346 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 POU2F2P09086 479 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 SAGP10523 405 aaPredicted RBP15.27■□□□□ 0.04
LIG1-206ENST00000594067 CPMP14384 443 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 RBMS1P29558 406 aaKnown RBP15.27■□□□□ 0.04
LIG1-206ENST00000594067 ACVR1BP36896 505 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 SLC36A2Q495M3 483 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 LNX2Q8N448 690 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 OR51A7Q8NH64 312 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 CCDC120Q96HB5 630 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 C4orf36Q96KX1 117 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 NDC1Q9BTX1 674 aa15.27■□□□□ 0.04
LIG1-206ENST00000594067 KLHL1Q9NR64 748 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms