RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GSNP06396 782 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 THRBP10828 461 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 CRHBPP24387 322 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 PTGDSP41222 190 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 TOP3AQ13472 1001 aaPredicted RBP17.9■□□□□ 0.46
LSM4-203ENST00000593829 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.9■□□□□ 0.46
LSM4-203ENST00000593829 FIGNL1Q6PIW4 674 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 TBPL2Q6SJ96 375 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 NCCRP1Q6ZVX7 275 aaPredicted RBP17.9■□□□□ 0.46
LSM4-203ENST00000593829 TMEM251Q8N6I4 163 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 MINDY2Q8NBR6 621 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 OR52N2Q8NGI0 321 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 RNF138Q8WVD3 245 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 MUS81Q96NY9 551 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 ZNF347Q96SE7 839 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 G6PC3Q9BUM1 346 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 ZDHHC11Q9H8X9 412 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 INIPQ9NRY2 104 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 B4GALT7Q9UBV7 327 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 ABCG2Q9UNQ0 655 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 NBASA2RRP1 2371 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 RAP2AP10114 183 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 MAGEA5P43359 124 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 TRPC1P48995 793 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 PSMD7P51665 324 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 GALNT10Q86SR1 603 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 FAM109AQ8N4B1 249 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 OR5D16Q8NGK9 328 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 RAD21L1Q9H4I0 556 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 SERHL2Q9H4I8 314 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 SELENONQ9NZV5 590 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 KCNE3Q9Y6H6 103 aa17.9■□□□□ 0.46
LSM4-203ENST00000593829 C2orf72A6NCS6 295 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 KPNA4O00629 521 aaPredicted RBP17.89■□□□□ 0.45
LSM4-203ENST00000593829 UTS2O95399 124 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 NCK1P16333 377 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 ELAVL4P26378 380 aaKnown RBP17.89■□□□□ 0.45
LSM4-203ENST00000593829 LCN1P31025 176 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 EVI2BP34910 448 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 CCNJQ5T5M9 372 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 ANGPTL8Q6UXH0 198 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 DNAJC14Q6Y2X3 702 aaPredicted RBP17.89■□□□□ 0.45
LSM4-203ENST00000593829 GHDCQ8N2G8 530 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 GTF2H4Q92759 462 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 DEFB127Q9H1M4 99 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 OR51I1Q9H343 314 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 USE1Q9NZ43 259 aa17.89■□□□□ 0.45
LSM4-203ENST00000593829 FADS1O60427 444 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 RFPL3SP0C7P2 107 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 CLK3P49761 638 aaKnown RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 CASP9P55211 416 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 RPS3AP61247 264 aaKnown RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 RBPJQ06330 500 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 ZNF846Q147U1 533 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 DCST2Q5T1A1 773 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 FNDC7Q5VTL7 733 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 TIGD3Q6B0B8 471 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 C8orf59Q8N0T1 100 aaPredicted RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 SPARTQ8N0X7 666 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 OR1J4Q8NGS1 313 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 MROQ9BYG7 248 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 ZNF703Q9H7S9 590 aaPredicted RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 FBXO34Q9NWN3 711 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 QPCTLQ9NXS2 382 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 FLRT3Q9NZU0 649 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 CORINQ9Y5Q5 1042 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 WIF1Q9Y5W5 379 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 GNB5O14775 395 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 CDC40O60508 579 aaKnown RBP eCLIP17.88■□□□□ 0.45
LSM4-203ENST00000593829 KRT75O95678 551 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 AGR2O95994 175 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 ELK4P28324 431 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 YAP1P46937 504 aaKnown RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 KHKP50053 298 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 SLC10A1Q14973 349 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 EIF2S3LQ2VIR3 472 aaKnown RBP17.88■□□□□ 0.45
LSM4-203ENST00000593829 GLYATQ6IB77 296 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 SLC2A7Q6PXP3 512 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 IFNEQ86WN2 208 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 OR52E4Q8NGH9 312 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 GNRHR2Q96P88 292 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 SLC6A13Q9NSD5 602 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 EXD2Q9NVH0 621 aa17.88■□□□□ 0.45
LSM4-203ENST00000593829 SNPHO15079 494 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 AK1P00568 194 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 EEF1B2P24534 225 aaKnown RBP17.87■□□□□ 0.45
LSM4-203ENST00000593829 GAS1P54826 345 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 OXA1LQ15070 435 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 FAM98BQ52LJ0 330 aaKnown RBP17.87■□□□□ 0.45
LSM4-203ENST00000593829 TNFAIP8L2Q6P589 184 aaPredicted RBP17.87■□□□□ 0.45
LSM4-203ENST00000593829 ZAR1Q86SH2 424 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 IGFN1Q86VF2 1251 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 RNF130Q86XS8 419 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 PRR7Q8TB68 274 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 MUL1Q969V5 352 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 RNF145Q96MT1 663 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 TBL1XR1Q9BZK7 514 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 SDHAF3Q9NRP4 125 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 NINQ8N4C6 2090 aa17.87■□□□□ 0.45
LSM4-203ENST00000593829 SCO2O43819 266 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms